Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD40P25942 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD40P25942 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD40P25942 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD40P25942 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CD40P25942 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CD40P25942 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD40P25942 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD40P25942 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CD40P25942 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CD40P25942 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.47■□□□□ 0.55
CD40P25942 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CD40P25942 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.47■□□□□ 0.55
CD40P25942 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.47■□□□□ 0.55
CD40P25942 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.47■□□□□ 0.55
CD40P25942 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.47■□□□□ 0.55
CD40P25942 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CD40P25942 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.47■□□□□ 0.55
CD40P25942 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CD40P25942 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.46■□□□□ 0.55
CD40P25942 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.46■□□□□ 0.55
CD40P25942 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.46■□□□□ 0.55
CD40P25942 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CD40P25942 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.46■□□□□ 0.55
CD40P25942 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 AP001160.3-201ENST00000601484 763 ntBASIC18.46■□□□□ 0.55
CD40P25942 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.46■□□□□ 0.55
CD40P25942 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.46■□□□□ 0.55
CD40P25942 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CD40P25942 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CD40P25942 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.46■□□□□ 0.55
CD40P25942 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CD40P25942 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 AC127496.7-201ENST00000625110 1798 ntBASIC18.45■□□□□ 0.54
CD40P25942 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.45■□□□□ 0.54
CD40P25942 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CD40P25942 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CD40P25942 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.45■□□□□ 0.54
CD40P25942 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CD40P25942 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.45■□□□□ 0.54
CD40P25942 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.45■□□□□ 0.54
CD40P25942 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.45■□□□□ 0.54
CD40P25942 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.45■□□□□ 0.54
CD40P25942 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CD40P25942 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.44■□□□□ 0.54
CD40P25942 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CD40P25942 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.44■□□□□ 0.54
CD40P25942 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.44■□□□□ 0.54
CD40P25942 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CD40P25942 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.43■□□□□ 0.54
CD40P25942 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.43■□□□□ 0.54
CD40P25942 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.43■□□□□ 0.54
CD40P25942 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
CD40P25942 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CD40P25942 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms