Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.98■□□□□ 0.47
LMO1P25800 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
LMO1P25800 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.98■□□□□ 0.47
LMO1P25800 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.98■□□□□ 0.47
LMO1P25800 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
LMO1P25800 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.98■□□□□ 0.47
LMO1P25800 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.98■□□□□ 0.47
LMO1P25800 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LMO1P25800 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
LMO1P25800 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.97■□□□□ 0.47
LMO1P25800 AC096631.2-201ENST00000436136 790 ntBASIC17.97■□□□□ 0.47
LMO1P25800 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.97■□□□□ 0.47
LMO1P25800 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.97■□□□□ 0.47
LMO1P25800 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.97■□□□□ 0.47
LMO1P25800 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LMO1P25800 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.97■□□□□ 0.47
LMO1P25800 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LMO1P25800 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.96■□□□□ 0.47
LMO1P25800 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
LMO1P25800 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.96■□□□□ 0.47
LMO1P25800 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
LMO1P25800 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LMO1P25800 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.96■□□□□ 0.47
LMO1P25800 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMO1P25800 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMO1P25800 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC17.96■□□□□ 0.47
LMO1P25800 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.96■□□□□ 0.47
LMO1P25800 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.96■□□□□ 0.47
LMO1P25800 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
LMO1P25800 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LMO1P25800 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.96■□□□□ 0.47
LMO1P25800 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMO1P25800 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.96■□□□□ 0.47
LMO1P25800 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LMO1P25800 AC026310.3-201ENST00000625186 2373 ntBASIC17.96■□□□□ 0.47
LMO1P25800 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
LMO1P25800 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
LMO1P25800 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LMO1P25800 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.95■□□□□ 0.46
LMO1P25800 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LMO1P25800 EDA-201ENST00000338901 1233 ntBASIC17.95■□□□□ 0.46
LMO1P25800 PBX2P1-201ENST00000493219 1291 ntBASIC17.95■□□□□ 0.46
LMO1P25800 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.95■□□□□ 0.46
LMO1P25800 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
LMO1P25800 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.95■□□□□ 0.46
LMO1P25800 AC126544.1-201ENST00000580842 1059 ntBASIC17.95■□□□□ 0.46
LMO1P25800 AP004607.7-201ENST00000527152 1677 ntBASIC17.95■□□□□ 0.46
LMO1P25800 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LMO1P25800 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LMO1P25800 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
LMO1P25800 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.94■□□□□ 0.46
LMO1P25800 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
LMO1P25800 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 MIR935-201ENST00000401179 91 ntBASIC17.94■□□□□ 0.46
LMO1P25800 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 IGHV3-19-201ENST00000521488 291 ntBASIC17.94■□□□□ 0.46
LMO1P25800 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.94■□□□□ 0.46
LMO1P25800 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.94■□□□□ 0.46
LMO1P25800 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.94■□□□□ 0.46
LMO1P25800 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.94■□□□□ 0.46
LMO1P25800 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.94■□□□□ 0.46
LMO1P25800 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
LMO1P25800 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
LMO1P25800 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LMO1P25800 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms