Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCND1P24385 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCND1P24385 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCND1P24385 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.43■■□□□ 1.02
CCND1P24385 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCND1P24385 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCND1P24385 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CCND1P24385 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCND1P24385 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.42■■□□□ 1.02
CCND1P24385 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
CCND1P24385 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC21.42■■□□□ 1.02
CCND1P24385 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.42■■□□□ 1.02
CCND1P24385 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
CCND1P24385 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.42■■□□□ 1.02
CCND1P24385 AL138724.1-201ENST00000606771 1088 ntBASIC21.42■■□□□ 1.02
CCND1P24385 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.42■■□□□ 1.02
CCND1P24385 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CCND1P24385 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCND1P24385 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCND1P24385 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.41■■□□□ 1.02
CCND1P24385 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCND1P24385 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CCND1P24385 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCND1P24385 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.41■■□□□ 1.02
CCND1P24385 AC008406.3-201ENST00000620001 1374 ntBASIC21.41■■□□□ 1.02
CCND1P24385 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCND1P24385 AC006455.2-201ENST00000429931 906 ntBASIC21.41■■□□□ 1.02
CCND1P24385 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.41■■□□□ 1.02
CCND1P24385 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.41■■□□□ 1.02
CCND1P24385 pRNA.6-201ENST00000610482 90 ntBASIC21.41■■□□□ 1.02
CCND1P24385 pRNA.5-201ENST00000612139 90 ntBASIC21.41■■□□□ 1.02
CCND1P24385 pRNA.11-201ENST00000618423 90 ntBASIC21.41■■□□□ 1.02
CCND1P24385 pRNA.13-201ENST00000619112 90 ntBASIC21.41■■□□□ 1.02
CCND1P24385 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCND1P24385 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCND1P24385 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.41■■□□□ 1.02
CCND1P24385 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCND1P24385 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCND1P24385 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCND1P24385 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
CCND1P24385 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCND1P24385 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 SYT6-210ENST00000641643 1587 ntBASIC21.4■■□□□ 1.02
CCND1P24385 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.4■■□□□ 1.02
CCND1P24385 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCND1P24385 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.4■■□□□ 1.02
CCND1P24385 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.4■■□□□ 1.02
CCND1P24385 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.4■■□□□ 1.02
CCND1P24385 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCND1P24385 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CCND1P24385 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCND1P24385 AC010542.4-201ENST00000563151 1910 ntBASIC21.39■■□□□ 1.02
CCND1P24385 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CCND1P24385 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.39■■□□□ 1.01
CCND1P24385 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCND1P24385 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCND1P24385 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
CCND1P24385 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
CCND1P24385 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCND1P24385 AC133637.1-201ENST00000624115 1537 ntBASIC21.39■■□□□ 1.01
CCND1P24385 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCND1P24385 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCND1P24385 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCND1P24385 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
CCND1P24385 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
CCND1P24385 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCND1P24385 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCND1P24385 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCND1P24385 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CCND1P24385 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCND1P24385 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCND1P24385 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCND1P24385 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CCND1P24385 MIR3181-201ENST00000578512 73 ntBASIC21.38■■□□□ 1.01
CCND1P24385 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CCND1P24385 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CCND1P24385 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CCND1P24385 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.38■■□□□ 1.01
CCND1P24385 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CCND1P24385 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.37■■□□□ 1.01
CCND1P24385 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
CCND1P24385 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CCND1P24385 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.37■■□□□ 1.01
CCND1P24385 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
CCND1P24385 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CCND1P24385 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms