Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CAPN3P20807 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN3P20807 AL031602.1-201ENST00000633169 911 ntBASIC20.57■□□□□ 0.88
CAPN3P20807 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN3P20807 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN3P20807 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN3P20807 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN3P20807 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.56■□□□□ 0.88
CAPN3P20807 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN3P20807 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN3P20807 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN3P20807 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CAPN3P20807 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN3P20807 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN3P20807 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN3P20807 AC135279.3-201ENST00000610945 1311 ntBASIC20.55■□□□□ 0.88
CAPN3P20807 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN3P20807 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN3P20807 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN3P20807 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN3P20807 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CAPN3P20807 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN3P20807 PBX2P1-201ENST00000493219 1291 ntBASIC20.55■□□□□ 0.88
CAPN3P20807 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CAPN3P20807 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN3P20807 PKD1P6-201ENST00000343738 4769 ntBASIC20.55■□□□□ 0.88
CAPN3P20807 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CAPN3P20807 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN3P20807 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN3P20807 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 AL157384.1-201ENST00000445995 2473 ntBASIC20.54■□□□□ 0.88
CAPN3P20807 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN3P20807 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.54■□□□□ 0.88
CAPN3P20807 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN3P20807 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CAPN3P20807 AC079089.2-201ENST00000531211 1277 ntBASIC20.54■□□□□ 0.88
CAPN3P20807 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN3P20807 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPN3P20807 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CAPN3P20807 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN3P20807 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.53■□□□□ 0.88
CAPN3P20807 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN3P20807 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN3P20807 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
CAPN3P20807 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN3P20807 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN3P20807 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.52■□□□□ 0.88
CAPN3P20807 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN3P20807 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPN3P20807 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.52■□□□□ 0.88
CAPN3P20807 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CAPN3P20807 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CAPN3P20807 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN3P20807 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CAPN3P20807 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN3P20807 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN3P20807 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN3P20807 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN3P20807 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN3P20807 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN3P20807 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN3P20807 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN3P20807 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN3P20807 AL512631.2-201ENST00000604634 923 ntBASIC20.51■□□□□ 0.87
CAPN3P20807 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN3P20807 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.51■□□□□ 0.87
CAPN3P20807 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN3P20807 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN3P20807 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.51■□□□□ 0.87
CAPN3P20807 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN3P20807 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN3P20807 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.51■□□□□ 0.87
CAPN3P20807 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CAPN3P20807 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPN3P20807 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CAPN3P20807 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN3P20807 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPN3P20807 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN3P20807 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.5■□□□□ 0.87
CAPN3P20807 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.5■□□□□ 0.87
CAPN3P20807 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms