Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.75■□□□□ 0.59
ATF1P18846 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.75■□□□□ 0.59
ATF1P18846 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
ATF1P18846 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ATF1P18846 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATF1P18846 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.74■□□□□ 0.59
ATF1P18846 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATF1P18846 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
ATF1P18846 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
ATF1P18846 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.74■□□□□ 0.59
ATF1P18846 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATF1P18846 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
ATF1P18846 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.74■□□□□ 0.59
ATF1P18846 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.74■□□□□ 0.59
ATF1P18846 AC241377.3-202ENST00000626088 1088 ntBASIC18.74■□□□□ 0.59
ATF1P18846 AC241585.3-202ENST00000628937 1088 ntBASIC18.74■□□□□ 0.59
ATF1P18846 AC245100.8-202ENST00000629247 1058 ntBASIC18.74■□□□□ 0.59
ATF1P18846 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.74■□□□□ 0.59
ATF1P18846 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.73■□□□□ 0.59
ATF1P18846 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.73■□□□□ 0.59
ATF1P18846 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
ATF1P18846 KRT16P3-201ENST00000439127 1283 ntBASIC18.73■□□□□ 0.59
ATF1P18846 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.73■□□□□ 0.59
ATF1P18846 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.73■□□□□ 0.59
ATF1P18846 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.73■□□□□ 0.59
ATF1P18846 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.73■□□□□ 0.59
ATF1P18846 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ATF1P18846 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
ATF1P18846 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ATF1P18846 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATF1P18846 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATF1P18846 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATF1P18846 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.72■□□□□ 0.59
ATF1P18846 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.72■□□□□ 0.59
ATF1P18846 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ATF1P18846 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ATF1P18846 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.72■□□□□ 0.59
ATF1P18846 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATF1P18846 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.71■□□□□ 0.59
ATF1P18846 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
ATF1P18846 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.71■□□□□ 0.59
ATF1P18846 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
ATF1P18846 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.71■□□□□ 0.59
ATF1P18846 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.71■□□□□ 0.59
ATF1P18846 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.71■□□□□ 0.59
ATF1P18846 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.71■□□□□ 0.59
ATF1P18846 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ATF1P18846 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ATF1P18846 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATF1P18846 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF1P18846 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF1P18846 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ATF1P18846 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
ATF1P18846 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF1P18846 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF1P18846 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATF1P18846 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF1P18846 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
ATF1P18846 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATF1P18846 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATF1P18846 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATF1P18846 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ATF1P18846 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATF1P18846 LINC01006-201ENST00000333319 2292 ntBASIC18.7■□□□□ 0.58
ATF1P18846 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms