Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 MIR3648-2-201ENST00000581792 180 ntBASIC22.33■■□□□ 1.17
H2AFXP16104 MIR3648-1-201ENST00000615959 180 ntBASIC22.33■■□□□ 1.17
H2AFXP16104 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
H2AFXP16104 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
H2AFXP16104 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.33■■□□□ 1.16
H2AFXP16104 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
H2AFXP16104 BX323043.1-201ENST00000641006 1765 ntBASIC22.33■■□□□ 1.16
H2AFXP16104 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
H2AFXP16104 EML3-217ENST00000531557 2509 ntTSL 5 BASIC22.32■■□□□ 1.16
H2AFXP16104 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2AFXP16104 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2AFXP16104 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
H2AFXP16104 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.32■■□□□ 1.16
H2AFXP16104 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2AFXP16104 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
H2AFXP16104 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.32■■□□□ 1.16
H2AFXP16104 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
H2AFXP16104 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.32■■□□□ 1.16
H2AFXP16104 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
H2AFXP16104 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
H2AFXP16104 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
H2AFXP16104 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC22.31■■□□□ 1.16
H2AFXP16104 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.31■■□□□ 1.16
H2AFXP16104 AC104564.3-201ENST00000582367 638 ntBASIC22.31■■□□□ 1.16
H2AFXP16104 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
H2AFXP16104 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC22.31■■□□□ 1.16
H2AFXP16104 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.31■■□□□ 1.16
H2AFXP16104 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.31■■□□□ 1.16
H2AFXP16104 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.31■■□□□ 1.16
H2AFXP16104 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
H2AFXP16104 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
H2AFXP16104 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
H2AFXP16104 AC004448.1-201ENST00000458332 883 ntBASIC22.3■■□□□ 1.16
H2AFXP16104 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC22.3■■□□□ 1.16
H2AFXP16104 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
H2AFXP16104 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2AFXP16104 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2AFXP16104 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
H2AFXP16104 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
H2AFXP16104 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.29■■□□□ 1.16
H2AFXP16104 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2AFXP16104 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
H2AFXP16104 ZNRF2P2-203ENST00000454624 420 ntBASIC22.29■■□□□ 1.16
H2AFXP16104 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2AFXP16104 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2AFXP16104 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
H2AFXP16104 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2AFXP16104 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2AFXP16104 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2AFXP16104 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.28■■□□□ 1.16
H2AFXP16104 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2AFXP16104 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.28■■□□□ 1.16
H2AFXP16104 AC098818.2-201ENST00000564925 2320 ntBASIC22.28■■□□□ 1.16
H2AFXP16104 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.28■■□□□ 1.16
H2AFXP16104 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.28■■□□□ 1.16
H2AFXP16104 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2AFXP16104 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
H2AFXP16104 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
H2AFXP16104 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
H2AFXP16104 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
H2AFXP16104 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
H2AFXP16104 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.27■■□□□ 1.16
H2AFXP16104 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
H2AFXP16104 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.27■■□□□ 1.16
H2AFXP16104 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
H2AFXP16104 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC22.27■■□□□ 1.16
H2AFXP16104 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
H2AFXP16104 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.27■■□□□ 1.16
H2AFXP16104 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
H2AFXP16104 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
H2AFXP16104 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
H2AFXP16104 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
H2AFXP16104 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H2AFXP16104 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
H2AFXP16104 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC22.26■■□□□ 1.15
H2AFXP16104 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
H2AFXP16104 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
H2AFXP16104 AC009086.3-201ENST00000623486 1008 ntBASIC22.26■■□□□ 1.15
H2AFXP16104 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms