Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 KAP104YBR017C 2757 nt2.61□□□□□ -1.99
RPL40BP0CH09 ESL1YIL151C 3357 nt2.61□□□□□ -1.99
RPL40BP0CH09 BPT1YLL015W 4680 nt2.6□□□□□ -1.99
RPL40BP0CH09 YLR278CYLR278C 4026 nt2.6□□□□□ -1.99
RPL40BP0CH09 THI22YPR121W 1719 nt2.6□□□□□ -1.99
RPL40BP0CH09 ETP1YHL010C 1758 nt2.6□□□□□ -1.99
RPL40BP0CH09 TOS8YGL096W 831 nt2.6□□□□□ -1.99
RPL40BP0CH09 RPL6AYML073C 531 nt2.6□□□□□ -1.99
RPL40BP0CH09 YBR134WYBR134W 402 nt2.6□□□□□ -1.99
RPL40BP0CH09 RAX2YLR084C 3663 nt2.6□□□□□ -1.99
RPL40BP0CH09 MPH1YIR002C 2982 nt2.6□□□□□ -1.99
RPL40BP0CH09 CLB4YLR210W 1383 nt2.6□□□□□ -1.99
RPL40BP0CH09 ARP8YOR141C 2646 nt2.59□□□□□ -1.99
RPL40BP0CH09 ILS1YBL076C 3219 nt2.59□□□□□ -1.99
RPL40BP0CH09 BDP1YNL039W 1785 nt2.59□□□□□ -1.99
RPL40BP0CH09 COS6YGR295C 1146 nt2.59□□□□□ -1.99
RPL40BP0CH09 RNR2YJL026W 1200 nt2.59□□□□□ -1.99
RPL40BP0CH09 UIP3YAR027W 708 nt2.59□□□□□ -1.99
RPL40BP0CH09 TPP1YMR156C 717 nt2.59□□□□□ -1.99
RPL40BP0CH09 PPA2YMR267W 933 nt2.59□□□□□ -1.99
RPL40BP0CH09 RBL2YOR265W 321 nt2.59□□□□□ -1.99
RPL40BP0CH09 MEF1YLR069C 2286 nt2.59□□□□□ -1.99
RPL40BP0CH09 WHI4YDL224C 1950 nt2.59□□□□□ -2
RPL40BP0CH09 TOM1YDR457W 9807 nt2.59□□□□□ -2
RPL40BP0CH09 ENA5YDR038C 3276 nt2.59□□□□□ -2
RPL40BP0CH09 SMI1YGR229C 1518 nt2.58□□□□□ -2
RPL40BP0CH09 KIP1YBL063W 3336 nt2.58□□□□□ -2
RPL40BP0CH09 YIL169CYIL169C 2988 nt2.58□□□□□ -2
RPL40BP0CH09 YLR297WYLR297W 390 nt2.58□□□□□ -2
RPL40BP0CH09 YOL159C-AYOL159C-A 273 nt2.58□□□□□ -2
RPL40BP0CH09 RSA1YPL193W 1146 nt2.58□□□□□ -2
RPL40BP0CH09 SDS23YGL056C 1584 nt2.57□□□□□ -2
RPL40BP0CH09 NMD2YHR077C 3270 nt2.57□□□□□ -2
RPL40BP0CH09 SEC7YDR170C 6030 nt2.57□□□□□ -2
RPL40BP0CH09 TCP1YDR212W 1680 nt2.57□□□□□ -2
RPL40BP0CH09 ECM29YHL030W 5607 nt2.57□□□□□ -2
RPL40BP0CH09 CDC20YGL116W 1833 nt2.57□□□□□ -2
RPL40BP0CH09 CDC10YCR002C 969 nt2.57□□□□□ -2
RPL40BP0CH09 EAF5YEL018W 840 nt2.57□□□□□ -2
RPL40BP0CH09 TCD1YHR003C 1290 nt2.57□□□□□ -2
RPL40BP0CH09 RNA1YMR235C 1224 nt2.57□□□□□ -2
RPL40BP0CH09 RPC34YNR003C 954 nt2.57□□□□□ -2
RPL40BP0CH09 YRB30YGL164C 1323 nt2.57□□□□□ -2
RPL40BP0CH09 GLO3YER122C 1482 nt2.57□□□□□ -2
RPL40BP0CH09 GIS4YML006C 2325 nt2.57□□□□□ -2
RPL40BP0CH09 SIR4YDR227W 4077 nt2.57□□□□□ -2
RPL40BP0CH09 GGA1YDR358W 1674 nt2.57□□□□□ -2
RPL40BP0CH09 ALE1YOR175C 1860 nt2.56□□□□□ -2
RPL40BP0CH09 NRP1YDL167C 2160 nt2.56□□□□□ -2
RPL40BP0CH09 RMT2YDR465C 1239 nt2.56□□□□□ -2
RPL40BP0CH09 PPT2YPL148C 522 nt2.56□□□□□ -2
RPL40BP0CH09 CAF130YGR134W 3369 nt2.56□□□□□ -2
RPL40BP0CH09 IMH1YLR309C 2736 nt2.55□□□□□ -2
RPL40BP0CH09 RIM1YCR028C-A 408 nt2.55□□□□□ -2
RPL40BP0CH09 VTC1YER072W 390 nt2.55□□□□□ -2
RPL40BP0CH09 PNC1YGL037C 651 nt2.55□□□□□ -2
RPL40BP0CH09 YHR032W-AYHR032W-A 180 nt2.55□□□□□ -2
RPL40BP0CH09 PEX18YHR160C 852 nt2.55□□□□□ -2
RPL40BP0CH09 PHO12YHR215W 1404 nt2.55□□□□□ -2
RPL40BP0CH09 TGL1YKL140W 1647 nt2.55□□□□□ -2
RPL40BP0CH09 PHO11YAR071W 1404 nt2.55□□□□□ -2
RPL40BP0CH09 YMR187CYMR187C 1296 nt2.55□□□□□ -2
RPL40BP0CH09 YPL014WYPL014W 1146 nt2.55□□□□□ -2
RPL40BP0CH09 ORC4YPR162C 1590 nt2.55□□□□□ -2
RPL40BP0CH09 PZF1YPR186C 1290 nt2.55□□□□□ -2
RPL40BP0CH09 RAD55YDR076W 1221 nt2.54□□□□□ -2
RPL40BP0CH09 PML39YML107C 1005 nt2.54□□□□□ -2
RPL40BP0CH09 PUT3YKL015W 2940 nt2.54□□□□□ -2
RPL40BP0CH09 YPL150WYPL150W 2706 nt2.54□□□□□ -2
RPL40BP0CH09 ISW2YOR304W 3363 nt2.53□□□□□ -2
RPL40BP0CH09 MGT1YDL200C 567 nt2.53□□□□□ -2
RPL40BP0CH09 PFA5YDR459C 1125 nt2.53□□□□□ -2
RPL40BP0CH09 RRT13YER066W 558 nt2.53□□□□□ -2
RPL40BP0CH09 RRT7YLL030C 342 nt2.53□□□□□ -2
RPL40BP0CH09 CDC73YLR418C 1182 nt2.53□□□□□ -2
RPL40BP0CH09 ATG17YLR423C 1254 nt2.53□□□□□ -2
RPL40BP0CH09 PRX1YBL064C 786 nt2.53□□□□□ -2
RPL40BP0CH09 YBR116CYBR116C 528 nt2.53□□□□□ -2
RPL40BP0CH09 YBR300CYBR300C 498 nt2.53□□□□□ -2
RPL40BP0CH09 CBP2YHL038C 1893 nt2.53□□□□□ -2
RPL40BP0CH09 YGR067CYGR067C 2415 nt2.53□□□□□ -2
RPL40BP0CH09 YBL005W-BYBL005W-B 5268 nt2.53□□□□□ -2.01
RPL40BP0CH09 MAD3YJL013C 1548 nt2.52□□□□□ -2.01
RPL40BP0CH09 ISM1YPL040C 3009 nt2.52□□□□□ -2.01
RPL40BP0CH09 LST7YGR057C 729 nt2.52□□□□□ -2.01
RPL40BP0CH09 VMA22YHR060W 546 nt2.52□□□□□ -2.01
RPL40BP0CH09 FOL3YMR113W 1284 nt2.52□□□□□ -2.01
RPL40BP0CH09 YOR385WYOR385W 873 nt2.52□□□□□ -2.01
RPL40BP0CH09 ANT1YPR128C 987 nt2.52□□□□□ -2.01
RPL40BP0CH09 SLM2YNL047C 1971 nt2.52□□□□□ -2.01
RPL40BP0CH09 URC2YDR520C 2319 nt2.51□□□□□ -2.01
RPL40BP0CH09 PFF1YBR074W 2931 nt2.51□□□□□ -2.01
RPL40BP0CH09 SNU23YDL098C 585 nt2.51□□□□□ -2.01
RPL40BP0CH09 YDL183CYDL183C 963 nt2.51□□□□□ -2.01
RPL40BP0CH09 YGR121W-AYGR121W-A 216 nt2.51□□□□□ -2.01
RPL40BP0CH09 YHI9YHR029C 885 nt2.51□□□□□ -2.01
RPL40BP0CH09 RPL13BYMR142C 600 nt2.51□□□□□ -2.01
RPL40BP0CH09 VAM10YOR068C 345 nt2.51□□□□□ -2.01
RPL40BP0CH09 NUP170YBL079W 4509 nt2.51□□□□□ -2.01
RPL40BP0CH09 FAS1YKL182W 6156 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 16.9 ms