Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
FREM3P0C091 AC137761.2-201ENST00000561729 223 ntBASIC19.49■□□□□ 0.71
FREM3P0C091 AC145350.3-201ENST00000569033 163 ntBASIC19.49■□□□□ 0.71
FREM3P0C091 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.49■□□□□ 0.71
FREM3P0C091 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM3P0C091 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM3P0C091 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
FREM3P0C091 AC242852.2-201ENST00000615738 1807 ntBASIC19.49■□□□□ 0.71
FREM3P0C091 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
FREM3P0C091 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
FREM3P0C091 KRT19P1-201ENST00000405746 1186 ntBASIC19.49■□□□□ 0.71
FREM3P0C091 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM3P0C091 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM3P0C091 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.49■□□□□ 0.71
FREM3P0C091 AC080038.3-201ENST00000623346 1952 ntBASIC19.49■□□□□ 0.71
FREM3P0C091 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FREM3P0C091 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM3P0C091 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM3P0C091 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.48■□□□□ 0.71
FREM3P0C091 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM3P0C091 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM3P0C091 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM3P0C091 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM3P0C091 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM3P0C091 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.48■□□□□ 0.71
FREM3P0C091 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FREM3P0C091 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
FREM3P0C091 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FREM3P0C091 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FREM3P0C091 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FREM3P0C091 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.47■□□□□ 0.71
FREM3P0C091 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.46■□□□□ 0.71
FREM3P0C091 AC104187.1-201ENST00000607510 612 ntBASIC19.46■□□□□ 0.71
FREM3P0C091 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
FREM3P0C091 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.46■□□□□ 0.71
FREM3P0C091 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.46■□□□□ 0.71
FREM3P0C091 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.46■□□□□ 0.71
FREM3P0C091 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.46■□□□□ 0.71
FREM3P0C091 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.46■□□□□ 0.71
FREM3P0C091 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.46■□□□□ 0.71
FREM3P0C091 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.46■□□□□ 0.71
FREM3P0C091 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.46■□□□□ 0.71
FREM3P0C091 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FREM3P0C091 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 AC092053.2-201ENST00000640557 1818 ntBASIC19.45■□□□□ 0.7
FREM3P0C091 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
FREM3P0C091 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.45■□□□□ 0.7
FREM3P0C091 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.45■□□□□ 0.7
FREM3P0C091 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.45■□□□□ 0.7
FREM3P0C091 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
FREM3P0C091 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.45■□□□□ 0.7
FREM3P0C091 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.45■□□□□ 0.7
FREM3P0C091 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
FREM3P0C091 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
FREM3P0C091 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
FREM3P0C091 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FREM3P0C091 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM3P0C091 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.44■□□□□ 0.7
FREM3P0C091 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
FREM3P0C091 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
FREM3P0C091 AC055733.4-201ENST00000638462 1354 ntBASIC19.44■□□□□ 0.7
FREM3P0C091 KRT87P-202ENST00000534226 1464 ntBASIC19.44■□□□□ 0.7
FREM3P0C091 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms