Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS1P07996 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
THBS1P07996 Z98882.1-201ENST00000622160 2253 ntBASIC19.71■□□□□ 0.75
THBS1P07996 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS1P07996 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.71■□□□□ 0.75
THBS1P07996 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.71■□□□□ 0.75
THBS1P07996 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.71■□□□□ 0.75
THBS1P07996 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS1P07996 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.71■□□□□ 0.75
THBS1P07996 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS1P07996 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS1P07996 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
THBS1P07996 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS1P07996 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS1P07996 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
THBS1P07996 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THBS1P07996 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS1P07996 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS1P07996 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.7■□□□□ 0.74
THBS1P07996 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THBS1P07996 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
THBS1P07996 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.69■□□□□ 0.74
THBS1P07996 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.69■□□□□ 0.74
THBS1P07996 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 AC106739.1-201ENST00000617035 715 ntBASIC19.69■□□□□ 0.74
THBS1P07996 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
THBS1P07996 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.69■□□□□ 0.74
THBS1P07996 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.69■□□□□ 0.74
THBS1P07996 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
THBS1P07996 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
THBS1P07996 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
THBS1P07996 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
THBS1P07996 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.68■□□□□ 0.74
THBS1P07996 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.68■□□□□ 0.74
THBS1P07996 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.68■□□□□ 0.74
THBS1P07996 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
THBS1P07996 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
THBS1P07996 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
THBS1P07996 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
THBS1P07996 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.68■□□□□ 0.74
THBS1P07996 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
THBS1P07996 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
THBS1P07996 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
THBS1P07996 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
THBS1P07996 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
THBS1P07996 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.67■□□□□ 0.74
THBS1P07996 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.67■□□□□ 0.74
THBS1P07996 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.67■□□□□ 0.74
THBS1P07996 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.67■□□□□ 0.74
THBS1P07996 IGHV3-19-201ENST00000521488 291 ntBASIC19.67■□□□□ 0.74
THBS1P07996 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.67■□□□□ 0.74
THBS1P07996 AC126544.1-201ENST00000580842 1059 ntBASIC19.67■□□□□ 0.74
THBS1P07996 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
THBS1P07996 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
THBS1P07996 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
THBS1P07996 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
THBS1P07996 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
THBS1P07996 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
THBS1P07996 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
THBS1P07996 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
THBS1P07996 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
THBS1P07996 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.66■□□□□ 0.74
THBS1P07996 SMUG1P1-201ENST00000590640 811 ntBASIC19.66■□□□□ 0.74
THBS1P07996 AL031432.3-201ENST00000607698 485 ntBASIC19.66■□□□□ 0.74
THBS1P07996 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.66■□□□□ 0.74
THBS1P07996 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.66■□□□□ 0.74
THBS1P07996 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
THBS1P07996 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 AL137060.1-201ENST00000618151 2648 ntBASIC19.66■□□□□ 0.74
THBS1P07996 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
THBS1P07996 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
THBS1P07996 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS1P07996 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
THBS1P07996 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS1P07996 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.65■□□□□ 0.74
THBS1P07996 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.65■□□□□ 0.74
THBS1P07996 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
THBS1P07996 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.65■□□□□ 0.74
THBS1P07996 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.65■□□□□ 0.74
THBS1P07996 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
THBS1P07996 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms