Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV3P03979 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV3P03979 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV3P03979 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV3P03979 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV3P03979 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC16.81■□□□□ 0.28
TRGV3P03979 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV3P03979 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV3P03979 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRGV3P03979 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRGV3P03979 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRGV3P03979 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.8■□□□□ 0.28
TRGV3P03979 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.8■□□□□ 0.28
TRGV3P03979 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 MIR6084-201ENST00000622012 110 ntBASIC16.8■□□□□ 0.28
TRGV3P03979 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.8■□□□□ 0.28
TRGV3P03979 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRGV3P03979 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TRGV3P03979 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.8■□□□□ 0.28
TRGV3P03979 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRGV3P03979 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TRGV3P03979 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.79■□□□□ 0.28
TRGV3P03979 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRGV3P03979 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRGV3P03979 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.79■□□□□ 0.28
TRGV3P03979 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC16.79■□□□□ 0.28
TRGV3P03979 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.79■□□□□ 0.28
TRGV3P03979 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.79■□□□□ 0.28
TRGV3P03979 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.79■□□□□ 0.28
TRGV3P03979 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.79■□□□□ 0.28
TRGV3P03979 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRGV3P03979 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.78■□□□□ 0.28
TRGV3P03979 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.78■□□□□ 0.28
TRGV3P03979 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 AK1-201ENST00000223836 736 ntTSL 3 BASIC16.78■□□□□ 0.28
TRGV3P03979 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.78■□□□□ 0.28
TRGV3P03979 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.78■□□□□ 0.28
TRGV3P03979 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 BX005040.4-201ENST00000637145 1518 ntBASIC16.78■□□□□ 0.28
TRGV3P03979 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.78■□□□□ 0.28
TRGV3P03979 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRGV3P03979 EP400NL-214ENST00000641289 2402 ntBASIC16.78■□□□□ 0.28
TRGV3P03979 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRGV3P03979 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.77■□□□□ 0.28
TRGV3P03979 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.77■□□□□ 0.28
TRGV3P03979 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.77■□□□□ 0.28
TRGV3P03979 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV3P03979 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TRGV3P03979 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRGV3P03979 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRGV3P03979 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.77■□□□□ 0.28
TRGV3P03979 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.77■□□□□ 0.28
TRGV3P03979 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.77■□□□□ 0.27
TRGV3P03979 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV3P03979 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.77■□□□□ 0.27
TRGV3P03979 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV3P03979 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRGV3P03979 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.77■□□□□ 0.27
TRGV3P03979 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV3P03979 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV3P03979 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRGV3P03979 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms