Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 AC009237.3-201ENST00000393279 1427 ntBASIC21.32■■□□□ 1
PRAMEF1O95521 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
PRAMEF1O95521 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.32■■□□□ 1
PRAMEF1O95521 AC027612.3-201ENST00000413684 1047 ntBASIC21.32■■□□□ 1
PRAMEF1O95521 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.32■■□□□ 1
PRAMEF1O95521 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.32■■□□□ 1
PRAMEF1O95521 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PRAMEF1O95521 AP006587.3-201ENST00000525742 1516 ntBASIC21.32■■□□□ 1
PRAMEF1O95521 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
PRAMEF1O95521 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
PRAMEF1O95521 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PRAMEF1O95521 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.32■■□□□ 1
PRAMEF1O95521 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC21.32■■□□□ 1
PRAMEF1O95521 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 AC026471.6-201ENST00000622954 1905 ntBASIC21.31■■□□□ 1
PRAMEF1O95521 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF1O95521 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PRAMEF1O95521 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.31■■□□□ 1
PRAMEF1O95521 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.31■■□□□ 1
PRAMEF1O95521 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
PRAMEF1O95521 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
PRAMEF1O95521 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.31■■□□□ 1
PRAMEF1O95521 LINC00565-201ENST00000562710 2331 ntBASIC21.3■■□□□ 1
PRAMEF1O95521 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PRAMEF1O95521 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 TPRG1LP1-201ENST00000598702 760 ntBASIC21.3■■□□□ 1
PRAMEF1O95521 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.3■■□□□ 1
PRAMEF1O95521 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.3■■□□□ 1
PRAMEF1O95521 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.3■■□□□ 1
PRAMEF1O95521 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 AC005224.4-201ENST00000583262 1652 ntBASIC21.3■■□□□ 1
PRAMEF1O95521 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRAMEF1O95521 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
PRAMEF1O95521 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.29■■□□□ 1
PRAMEF1O95521 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.29■■□□□ 1
PRAMEF1O95521 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.29■■□□□ 1
PRAMEF1O95521 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.29■■□□□ 1
PRAMEF1O95521 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF1O95521 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF1O95521 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.28■■□□□ 1
PRAMEF1O95521 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF1O95521 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF1O95521 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF1O95521 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF1O95521 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PRAMEF1O95521 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF1O95521 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF1O95521 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEF1O95521 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF1O95521 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF1O95521 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF1O95521 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PRAMEF1O95521 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEF1O95521 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PRAMEF1O95521 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEF1O95521 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEF1O95521 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF1O95521 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF1O95521 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PRAMEF1O95521 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.27■■□□□ 1
PRAMEF1O95521 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.27■■□□□ 1
PRAMEF1O95521 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PRAMEF1O95521 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.27■□□□□ 0.99
PRAMEF1O95521 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRAMEF1O95521 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRAMEF1O95521 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PRAMEF1O95521 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PRAMEF1O95521 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 YBX1P1-201ENST00000445822 960 ntBASIC21.26■□□□□ 0.99
PRAMEF1O95521 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PRAMEF1O95521 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 FBXW4P1-201ENST00000426721 2239 ntBASIC21.26■□□□□ 0.99
PRAMEF1O95521 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRAMEF1O95521 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF1O95521 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.26■□□□□ 0.99
PRAMEF1O95521 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms