Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA1O95477 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA1O95477 AC009237.3-201ENST00000393279 1427 ntBASIC17.89■□□□□ 0.45
ABCA1O95477 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA1O95477 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA1O95477 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ABCA1O95477 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCA1O95477 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.89■□□□□ 0.45
ABCA1O95477 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
ABCA1O95477 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ABCA1O95477 POU5F1P3-201ENST00000428824 1078 ntBASIC17.88■□□□□ 0.45
ABCA1O95477 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA1O95477 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA1O95477 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA1O95477 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA1O95477 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCA1O95477 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.88■□□□□ 0.45
ABCA1O95477 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
ABCA1O95477 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA1O95477 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCA1O95477 AC010141.3-201ENST00000456659 717 ntBASIC17.88■□□□□ 0.45
ABCA1O95477 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCA1O95477 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.88■□□□□ 0.45
ABCA1O95477 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA1O95477 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
ABCA1O95477 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ABCA1O95477 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
ABCA1O95477 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.87■□□□□ 0.45
ABCA1O95477 PRORSD1P-201ENST00000295112 541 ntBASIC17.87■□□□□ 0.45
ABCA1O95477 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCA1O95477 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCA1O95477 AC133552.2-202ENST00000575694 574 ntBASIC17.87■□□□□ 0.45
ABCA1O95477 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.87■□□□□ 0.45
ABCA1O95477 ITM2C-210ENST00000620962 501 ntBASIC17.87■□□□□ 0.45
ABCA1O95477 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCA1O95477 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
ABCA1O95477 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
ABCA1O95477 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.87■□□□□ 0.45
ABCA1O95477 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.87■□□□□ 0.45
ABCA1O95477 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 FAM201B-201ENST00000458407 597 ntBASIC17.86■□□□□ 0.45
ABCA1O95477 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.86■□□□□ 0.45
ABCA1O95477 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.86■□□□□ 0.45
ABCA1O95477 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
ABCA1O95477 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.86■□□□□ 0.45
ABCA1O95477 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
ABCA1O95477 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCA1O95477 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
ABCA1O95477 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
ABCA1O95477 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.85■□□□□ 0.45
ABCA1O95477 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.84■□□□□ 0.45
ABCA1O95477 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.84■□□□□ 0.45
ABCA1O95477 AC013268.1-206ENST00000638368 961 ntBASIC17.84■□□□□ 0.45
ABCA1O95477 AC112229.1-201ENST00000639295 961 ntBASIC17.84■□□□□ 0.45
ABCA1O95477 AL353803.4-201ENST00000565882 1934 ntBASIC17.84■□□□□ 0.45
ABCA1O95477 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.84■□□□□ 0.45
ABCA1O95477 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.84■□□□□ 0.45
ABCA1O95477 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.84■□□□□ 0.45
ABCA1O95477 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.84■□□□□ 0.45
ABCA1O95477 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.84■□□□□ 0.45
ABCA1O95477 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ABCA1O95477 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.84■□□□□ 0.45
ABCA1O95477 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.84■□□□□ 0.45
ABCA1O95477 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ABCA1O95477 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ABCA1O95477 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ABCA1O95477 RNA5SP413-201ENST00000516373 109 ntBASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms