Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC012414.1-201ENST00000556676 535 ntBASIC19.82■□□□□ 0.76
NKX2-2O95096 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
NKX2-2O95096 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX2-2O95096 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.82■□□□□ 0.76
NKX2-2O95096 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NKX2-2O95096 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NKX2-2O95096 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.81■□□□□ 0.76
NKX2-2O95096 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-2O95096 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.81■□□□□ 0.76
NKX2-2O95096 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-2O95096 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-2O95096 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-2O95096 AC105265.2-201ENST00000467189 838 ntBASIC19.81■□□□□ 0.76
NKX2-2O95096 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.81■□□□□ 0.76
NKX2-2O95096 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.81■□□□□ 0.76
NKX2-2O95096 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.81■□□□□ 0.76
NKX2-2O95096 AC009237.3-201ENST00000393279 1427 ntBASIC19.81■□□□□ 0.76
NKX2-2O95096 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 AC244015.2-201ENST00000616358 1861 ntBASIC19.81■□□□□ 0.76
NKX2-2O95096 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 BX005040.4-201ENST00000637145 1518 ntBASIC19.81■□□□□ 0.76
NKX2-2O95096 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NKX2-2O95096 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NKX2-2O95096 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-2O95096 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-2O95096 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-2O95096 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-2O95096 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-2O95096 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NKX2-2O95096 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.8■□□□□ 0.76
NKX2-2O95096 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-2O95096 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NKX2-2O95096 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.79■□□□□ 0.76
NKX2-2O95096 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.79■□□□□ 0.76
NKX2-2O95096 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NKX2-2O95096 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.79■□□□□ 0.76
NKX2-2O95096 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
NKX2-2O95096 AC104564.3-201ENST00000582367 638 ntBASIC19.79■□□□□ 0.76
NKX2-2O95096 AL354811.1-201ENST00000610286 706 ntBASIC19.79■□□□□ 0.76
NKX2-2O95096 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.79■□□□□ 0.76
NKX2-2O95096 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NKX2-2O95096 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NKX2-2O95096 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-2O95096 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-2O95096 AC003102.1-202ENST00000563394 1796 ntBASIC19.78■□□□□ 0.76
NKX2-2O95096 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-2O95096 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NKX2-2O95096 IRS3P-201ENST00000223076 1006 ntBASIC19.78■□□□□ 0.76
NKX2-2O95096 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NKX2-2O95096 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-2O95096 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-2O95096 AL358852.1-201ENST00000623174 1268 ntBASIC19.78■□□□□ 0.76
NKX2-2O95096 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NKX2-2O95096 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NKX2-2O95096 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NKX2-2O95096 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.78■□□□□ 0.76
NKX2-2O95096 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.78■□□□□ 0.76
NKX2-2O95096 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-2O95096 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-2O95096 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.77■□□□□ 0.76
NKX2-2O95096 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-2O95096 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.77■□□□□ 0.76
NKX2-2O95096 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.77■□□□□ 0.76
NKX2-2O95096 AC055733.4-201ENST00000638462 1354 ntBASIC19.77■□□□□ 0.76
NKX2-2O95096 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NKX2-2O95096 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NKX2-2O95096 AC005224.4-201ENST00000583262 1652 ntBASIC19.77■□□□□ 0.76
NKX2-2O95096 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-2O95096 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NKX2-2O95096 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.76■□□□□ 0.75
NKX2-2O95096 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NKX2-2O95096 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.76■□□□□ 0.75
NKX2-2O95096 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
NKX2-2O95096 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NKX2-2O95096 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-2O95096 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NKX2-2O95096 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms