Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.7■□□□□ 0.58
KDM4BO94953 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KDM4BO94953 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.69■□□□□ 0.58
KDM4BO94953 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
KDM4BO94953 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.69■□□□□ 0.58
KDM4BO94953 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.69■□□□□ 0.58
KDM4BO94953 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.69■□□□□ 0.58
KDM4BO94953 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.69■□□□□ 0.58
KDM4BO94953 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM4BO94953 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
KDM4BO94953 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KDM4BO94953 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.68■□□□□ 0.58
KDM4BO94953 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
KDM4BO94953 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KDM4BO94953 AC244015.2-201ENST00000616358 1861 ntBASIC18.68■□□□□ 0.58
KDM4BO94953 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.68■□□□□ 0.58
KDM4BO94953 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
KDM4BO94953 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.68■□□□□ 0.58
KDM4BO94953 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM4BO94953 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
KDM4BO94953 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KDM4BO94953 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.67■□□□□ 0.58
KDM4BO94953 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM4BO94953 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM4BO94953 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.67■□□□□ 0.58
KDM4BO94953 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.67■□□□□ 0.58
KDM4BO94953 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.67■□□□□ 0.58
KDM4BO94953 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM4BO94953 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM4BO94953 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDM4BO94953 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
KDM4BO94953 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDM4BO94953 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KDM4BO94953 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
KDM4BO94953 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.66■□□□□ 0.58
KDM4BO94953 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.66■□□□□ 0.58
KDM4BO94953 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDM4BO94953 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDM4BO94953 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.66■□□□□ 0.58
KDM4BO94953 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDM4BO94953 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
KDM4BO94953 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDM4BO94953 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
KDM4BO94953 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KDM4BO94953 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDM4BO94953 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.65■□□□□ 0.58
KDM4BO94953 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDM4BO94953 AC004687.1-201ENST00000579003 1625 ntBASIC18.65■□□□□ 0.58
KDM4BO94953 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDM4BO94953 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KDM4BO94953 AL035685.1-201ENST00000636663 812 ntBASIC18.65■□□□□ 0.58
KDM4BO94953 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDM4BO94953 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDM4BO94953 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.65■□□□□ 0.58
KDM4BO94953 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDM4BO94953 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.65■□□□□ 0.58
KDM4BO94953 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KDM4BO94953 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDM4BO94953 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.65■□□□□ 0.58
KDM4BO94953 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
KDM4BO94953 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDM4BO94953 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDM4BO94953 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDM4BO94953 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDM4BO94953 KRT16P3-201ENST00000439127 1283 ntBASIC18.64■□□□□ 0.57
KDM4BO94953 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.64■□□□□ 0.57
KDM4BO94953 AL117332.1-201ENST00000622628 974 ntBASIC18.64■□□□□ 0.57
KDM4BO94953 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDM4BO94953 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDM4BO94953 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms