Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.34■□□□□ 0.37
CLN5O75503 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLN5O75503 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.34■□□□□ 0.37
CLN5O75503 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
CLN5O75503 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.34■□□□□ 0.37
CLN5O75503 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLN5O75503 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CLN5O75503 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLN5O75503 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.34■□□□□ 0.37
CLN5O75503 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.34■□□□□ 0.37
CLN5O75503 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLN5O75503 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CLN5O75503 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.33■□□□□ 0.37
CLN5O75503 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.33■□□□□ 0.37
CLN5O75503 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.33■□□□□ 0.37
CLN5O75503 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CLN5O75503 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.33■□□□□ 0.37
CLN5O75503 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLN5O75503 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.33■□□□□ 0.37
CLN5O75503 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.33■□□□□ 0.36
CLN5O75503 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.33■□□□□ 0.36
CLN5O75503 FP325331.1-202ENST00000623531 1380 ntBASIC17.33■□□□□ 0.36
CLN5O75503 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLN5O75503 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLN5O75503 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.33■□□□□ 0.36
CLN5O75503 KRT125P-201ENST00000546827 989 ntBASIC17.33■□□□□ 0.36
CLN5O75503 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.33■□□□□ 0.36
CLN5O75503 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 AL020996.1-203ENST00000536896 2307 ntBASIC17.33■□□□□ 0.36
CLN5O75503 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CLN5O75503 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLN5O75503 LINC01529-204ENST00000636474 1715 ntBASIC17.33■□□□□ 0.36
CLN5O75503 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLN5O75503 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLN5O75503 Z92544.1-202ENST00000571933 1220 ntBASIC17.32■□□□□ 0.36
CLN5O75503 AC092028.1-203ENST00000608262 953 ntBASIC17.32■□□□□ 0.36
CLN5O75503 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLN5O75503 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLN5O75503 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLN5O75503 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLN5O75503 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CLN5O75503 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.31■□□□□ 0.36
CLN5O75503 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.31■□□□□ 0.36
CLN5O75503 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.31■□□□□ 0.36
CLN5O75503 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.31■□□□□ 0.36
CLN5O75503 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLN5O75503 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
CLN5O75503 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLN5O75503 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLN5O75503 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC17.3■□□□□ 0.36
CLN5O75503 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.3■□□□□ 0.36
CLN5O75503 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CLN5O75503 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLN5O75503 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.29■□□□□ 0.36
CLN5O75503 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLN5O75503 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLN5O75503 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLN5O75503 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLN5O75503 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms