Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 Z92544.1-202ENST00000571933 1220 ntBASIC16.58■□□□□ 0.24
ZNF253O75346 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF253O75346 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF253O75346 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF253O75346 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF253O75346 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF253O75346 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
ZNF253O75346 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
ZNF253O75346 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF253O75346 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF253O75346 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF253O75346 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF253O75346 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC16.57■□□□□ 0.24
ZNF253O75346 KRT125P-201ENST00000546827 989 ntBASIC16.57■□□□□ 0.24
ZNF253O75346 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF253O75346 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF253O75346 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF253O75346 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF253O75346 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF253O75346 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF253O75346 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF253O75346 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
ZNF253O75346 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF253O75346 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF253O75346 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF253O75346 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF253O75346 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF253O75346 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
ZNF253O75346 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF253O75346 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC16.56■□□□□ 0.24
ZNF253O75346 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.56■□□□□ 0.24
ZNF253O75346 MTDHP2-201ENST00000601468 714 ntBASIC16.56■□□□□ 0.24
ZNF253O75346 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.56■□□□□ 0.24
ZNF253O75346 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.56■□□□□ 0.24
ZNF253O75346 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.56■□□□□ 0.24
ZNF253O75346 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
ZNF253O75346 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
ZNF253O75346 AC004687.1-201ENST00000579003 1625 ntBASIC16.56■□□□□ 0.24
ZNF253O75346 C17orf82-201ENST00000623772 1530 ntBASIC16.55■□□□□ 0.24
ZNF253O75346 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
ZNF253O75346 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.55■□□□□ 0.24
ZNF253O75346 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ZNF253O75346 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF253O75346 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ZNF253O75346 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.55■□□□□ 0.24
ZNF253O75346 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
ZNF253O75346 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF253O75346 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.55■□□□□ 0.24
ZNF253O75346 AC007952.6-201ENST00000573168 2673 ntBASIC16.55■□□□□ 0.24
ZNF253O75346 AC003957.1-201ENST00000625108 2673 ntBASIC16.55■□□□□ 0.24
ZNF253O75346 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 AC005229.4-201ENST00000610085 2198 ntBASIC16.55■□□□□ 0.24
ZNF253O75346 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
ZNF253O75346 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ZNF253O75346 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
ZNF253O75346 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ZNF253O75346 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ZNF253O75346 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF253O75346 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ZNF253O75346 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 VGF-203ENST00000611537 1622 ntTSL 5 BASIC16.54■□□□□ 0.24
ZNF253O75346 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.54■□□□□ 0.24
ZNF253O75346 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ZNF253O75346 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms