Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SSSCA1O60232 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SSSCA1O60232 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.42■□□□□ 0.38
SSSCA1O60232 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSSCA1O60232 LINC01006-201ENST00000333319 2292 ntBASIC17.41■□□□□ 0.38
SSSCA1O60232 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC17.41■□□□□ 0.38
SSSCA1O60232 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SSSCA1O60232 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.41■□□□□ 0.38
SSSCA1O60232 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SSSCA1O60232 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.41■□□□□ 0.38
SSSCA1O60232 PVT1_1.1-201ENST00000615125 194 ntBASIC17.41■□□□□ 0.38
SSSCA1O60232 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.41■□□□□ 0.38
SSSCA1O60232 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SSSCA1O60232 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SSSCA1O60232 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.4■□□□□ 0.38
SSSCA1O60232 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SSSCA1O60232 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
SSSCA1O60232 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.4■□□□□ 0.38
SSSCA1O60232 TK2-202ENST00000417693 1046 ntTSL 2 BASIC17.4■□□□□ 0.38
SSSCA1O60232 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.4■□□□□ 0.38
SSSCA1O60232 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.4■□□□□ 0.38
SSSCA1O60232 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.4■□□□□ 0.38
SSSCA1O60232 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SSSCA1O60232 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SSSCA1O60232 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SSSCA1O60232 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SSSCA1O60232 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSSCA1O60232 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.39■□□□□ 0.37
SSSCA1O60232 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.39■□□□□ 0.37
SSSCA1O60232 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSSCA1O60232 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.39■□□□□ 0.37
SSSCA1O60232 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.39■□□□□ 0.37
SSSCA1O60232 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SSSCA1O60232 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSSCA1O60232 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.39■□□□□ 0.37
SSSCA1O60232 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.39■□□□□ 0.37
SSSCA1O60232 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSSCA1O60232 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SSSCA1O60232 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.38■□□□□ 0.37
SSSCA1O60232 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SSSCA1O60232 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.38■□□□□ 0.37
SSSCA1O60232 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SSSCA1O60232 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.38■□□□□ 0.37
SSSCA1O60232 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SSSCA1O60232 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.38■□□□□ 0.37
SSSCA1O60232 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.38■□□□□ 0.37
SSSCA1O60232 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC17.38■□□□□ 0.37
SSSCA1O60232 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
SSSCA1O60232 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SSSCA1O60232 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SSSCA1O60232 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.37■□□□□ 0.37
SSSCA1O60232 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
SSSCA1O60232 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.37■□□□□ 0.37
SSSCA1O60232 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SSSCA1O60232 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 AC074183.2-201ENST00000623112 922 ntBASIC17.37■□□□□ 0.37
SSSCA1O60232 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.37■□□□□ 0.37
SSSCA1O60232 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
SSSCA1O60232 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.37■□□□□ 0.37
SSSCA1O60232 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSSCA1O60232 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSSCA1O60232 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SSSCA1O60232 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SSSCA1O60232 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms