Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.8■■□□□ 1.08
KDELR3O43731 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
KDELR3O43731 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
KDELR3O43731 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.8■■□□□ 1.08
KDELR3O43731 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
KDELR3O43731 FAM99A-202ENST00000538190 1989 ntBASIC21.79■■□□□ 1.08
KDELR3O43731 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.79■■□□□ 1.08
KDELR3O43731 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.79■■□□□ 1.08
KDELR3O43731 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
KDELR3O43731 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.79■■□□□ 1.08
KDELR3O43731 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
KDELR3O43731 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
KDELR3O43731 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KDELR3O43731 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KDELR3O43731 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KDELR3O43731 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
KDELR3O43731 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.78■■□□□ 1.08
KDELR3O43731 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
KDELR3O43731 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.78■■□□□ 1.08
KDELR3O43731 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.78■■□□□ 1.08
KDELR3O43731 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
KDELR3O43731 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.78■■□□□ 1.08
KDELR3O43731 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.78■■□□□ 1.08
KDELR3O43731 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
KDELR3O43731 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
KDELR3O43731 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 AL162430.1-201ENST00000480705 870 ntBASIC21.77■■□□□ 1.08
KDELR3O43731 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.77■■□□□ 1.08
KDELR3O43731 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.77■■□□□ 1.08
KDELR3O43731 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.77■■□□□ 1.08
KDELR3O43731 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.77■■□□□ 1.08
KDELR3O43731 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
KDELR3O43731 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.77■■□□□ 1.08
KDELR3O43731 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
KDELR3O43731 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
KDELR3O43731 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.76■■□□□ 1.07
KDELR3O43731 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.76■■□□□ 1.07
KDELR3O43731 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.76■■□□□ 1.07
KDELR3O43731 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.76■■□□□ 1.07
KDELR3O43731 KRT18P5-201ENST00000436075 1291 ntBASIC21.76■■□□□ 1.07
KDELR3O43731 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.76■■□□□ 1.07
KDELR3O43731 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.76■■□□□ 1.07
KDELR3O43731 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.76■■□□□ 1.07
KDELR3O43731 NTF6G-201ENST00000591094 616 ntBASIC21.76■■□□□ 1.07
KDELR3O43731 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 AC026471.6-201ENST00000622954 1905 ntBASIC21.76■■□□□ 1.07
KDELR3O43731 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
KDELR3O43731 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.75■■□□□ 1.07
KDELR3O43731 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.75■■□□□ 1.07
KDELR3O43731 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
KDELR3O43731 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.75■■□□□ 1.07
KDELR3O43731 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.75■■□□□ 1.07
KDELR3O43731 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
KDELR3O43731 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 AP004607.4-201ENST00000530158 1459 ntBASIC21.75■■□□□ 1.07
KDELR3O43731 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
KDELR3O43731 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDELR3O43731 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
KDELR3O43731 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDELR3O43731 C11orf96-202ENST00000528572 1834 ntBASIC21.74■■□□□ 1.07
KDELR3O43731 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDELR3O43731 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDELR3O43731 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.74■■□□□ 1.07
KDELR3O43731 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.74■■□□□ 1.07
KDELR3O43731 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
KDELR3O43731 KRT87P-202ENST00000534226 1464 ntBASIC21.74■■□□□ 1.07
KDELR3O43731 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
KDELR3O43731 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.74■■□□□ 1.07
KDELR3O43731 EP400NL-214ENST00000641289 2402 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms