Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXS1O43638 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
FOXS1O43638 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXS1O43638 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXS1O43638 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXS1O43638 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXS1O43638 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXS1O43638 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXS1O43638 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXS1O43638 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXS1O43638 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.24■□□□□ 0.83
FOXS1O43638 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXS1O43638 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
FOXS1O43638 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.24■□□□□ 0.83
FOXS1O43638 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXS1O43638 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXS1O43638 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXS1O43638 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXS1O43638 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
FOXS1O43638 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.23■□□□□ 0.83
FOXS1O43638 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXS1O43638 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.23■□□□□ 0.83
FOXS1O43638 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
FOXS1O43638 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.23■□□□□ 0.83
FOXS1O43638 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.23■□□□□ 0.83
FOXS1O43638 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
FOXS1O43638 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.23■□□□□ 0.83
FOXS1O43638 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXS1O43638 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
FOXS1O43638 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
FOXS1O43638 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.22■□□□□ 0.83
FOXS1O43638 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.22■□□□□ 0.83
FOXS1O43638 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.22■□□□□ 0.83
FOXS1O43638 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.22■□□□□ 0.83
FOXS1O43638 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
FOXS1O43638 KRT87P-202ENST00000534226 1464 ntBASIC20.22■□□□□ 0.83
FOXS1O43638 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
FOXS1O43638 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXS1O43638 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.21■□□□□ 0.83
FOXS1O43638 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
FOXS1O43638 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.21■□□□□ 0.83
FOXS1O43638 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FOXS1O43638 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXS1O43638 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXS1O43638 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXS1O43638 AC026471.6-201ENST00000622954 1905 ntBASIC20.2■□□□□ 0.82
FOXS1O43638 ECEL1P1-201ENST00000373592 1742 ntBASIC20.2■□□□□ 0.82
FOXS1O43638 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXS1O43638 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.2■□□□□ 0.82
FOXS1O43638 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXS1O43638 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXS1O43638 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
FOXS1O43638 IKBKGP1-201ENST00000612193 1073 ntBASIC20.2■□□□□ 0.82
FOXS1O43638 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FOXS1O43638 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXS1O43638 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXS1O43638 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.2■□□□□ 0.82
FOXS1O43638 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FOXS1O43638 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.2■□□□□ 0.82
FOXS1O43638 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXS1O43638 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXS1O43638 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.19■□□□□ 0.82
FOXS1O43638 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXS1O43638 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.19■□□□□ 0.82
FOXS1O43638 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
FOXS1O43638 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXS1O43638 AC092437.1-201ENST00000624794 1048 ntBASIC20.19■□□□□ 0.82
FOXS1O43638 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXS1O43638 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXS1O43638 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXS1O43638 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FOXS1O43638 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FOXS1O43638 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.19■□□□□ 0.82
FOXS1O43638 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXS1O43638 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
FOXS1O43638 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FOXS1O43638 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
FOXS1O43638 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.18■□□□□ 0.82
FOXS1O43638 AC104187.1-201ENST00000607510 612 ntBASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms