Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SOX1O00570 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SOX1O00570 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.29
SOX1O00570 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.14■■□□□ 1.29
SOX1O00570 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
SOX1O00570 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SOX1O00570 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SOX1O00570 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SOX1O00570 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SOX1O00570 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC23.13■■□□□ 1.29
SOX1O00570 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC23.13■■□□□ 1.29
SOX1O00570 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.13■■□□□ 1.29
SOX1O00570 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC23.13■■□□□ 1.29
SOX1O00570 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SOX1O00570 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
SOX1O00570 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.13■■□□□ 1.29
SOX1O00570 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
SOX1O00570 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.12■■□□□ 1.29
SOX1O00570 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SOX1O00570 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SOX1O00570 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SOX1O00570 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SOX1O00570 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SOX1O00570 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
SOX1O00570 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
SOX1O00570 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC23.12■■□□□ 1.29
SOX1O00570 AC233702.5-201ENST00000584107 538 ntBASIC23.12■■□□□ 1.29
SOX1O00570 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
SOX1O00570 CD177P1-201ENST00000606252 935 ntBASIC23.12■■□□□ 1.29
SOX1O00570 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC23.12■■□□□ 1.29
SOX1O00570 DUSP8P5-201ENST00000422884 1815 ntBASIC23.12■■□□□ 1.29
SOX1O00570 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC23.11■■□□□ 1.29
SOX1O00570 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
SOX1O00570 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX1O00570 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX1O00570 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX1O00570 POU5F1P4-201ENST00000413175 1085 ntBASIC23.11■■□□□ 1.29
SOX1O00570 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.11■■□□□ 1.29
SOX1O00570 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC23.11■■□□□ 1.29
SOX1O00570 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.11■■□□□ 1.29
SOX1O00570 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.11■■□□□ 1.29
SOX1O00570 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SOX1O00570 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SOX1O00570 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.1■■□□□ 1.29
SOX1O00570 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC23.1■■□□□ 1.29
SOX1O00570 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SOX1O00570 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
SOX1O00570 AC012618.2-201ENST00000428058 849 ntBASIC23.1■■□□□ 1.29
SOX1O00570 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
SOX1O00570 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC23.1■■□□□ 1.29
SOX1O00570 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC23.1■■□□□ 1.29
SOX1O00570 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SOX1O00570 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.1■■□□□ 1.29
SOX1O00570 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC23.1■■□□□ 1.29
SOX1O00570 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SOX1O00570 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SOX1O00570 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX1O00570 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.09■■□□□ 1.29
SOX1O00570 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX1O00570 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX1O00570 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX1O00570 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SOX1O00570 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
SOX1O00570 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
SOX1O00570 PRKY-204ENST00000533551 1019 ntBASIC23.09■■□□□ 1.29
SOX1O00570 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.09■■□□□ 1.29
SOX1O00570 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SOX1O00570 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.09■■□□□ 1.29
SOX1O00570 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SOX1O00570 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOX1O00570 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SOX1O00570 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOX1O00570 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOX1O00570 RPS2P55-201ENST00000397318 883 ntBASIC23.08■■□□□ 1.29
SOX1O00570 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOX1O00570 AC107956.1-201ENST00000494359 873 ntBASIC23.08■■□□□ 1.29
SOX1O00570 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.08■■□□□ 1.29
SOX1O00570 AC060766.5-201ENST00000590539 871 ntBASIC23.08■■□□□ 1.29
SOX1O00570 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.08■■□□□ 1.29
SOX1O00570 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SOX1O00570 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.08■■□□□ 1.28
SOX1O00570 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.08■■□□□ 1.28
SOX1O00570 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
SOX1O00570 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SOX1O00570 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SOX1O00570 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SOX1O00570 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SOX1O00570 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SOX1O00570 KRT17P3-201ENST00000420566 1262 ntBASIC23.07■■□□□ 1.28
SOX1O00570 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC23.07■■□□□ 1.28
SOX1O00570 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.07■■□□□ 1.28
SOX1O00570 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC23.07■■□□□ 1.28
SOX1O00570 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SOX1O00570 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC23.07■■□□□ 1.28
SOX1O00570 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC23.07■■□□□ 1.28
SOX1O00570 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SOX1O00570 AL049597.2-201ENST00000565575 961 ntBASIC23.07■■□□□ 1.28
SOX1O00570 AL590326.2-201ENST00000625139 305 ntBASIC23.07■■□□□ 1.28
SOX1O00570 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
SOX1O00570 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms