Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC7O00311 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC7O00311 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.01■□□□□ 0.95
CDC7O00311 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC7O00311 AC106739.1-201ENST00000617035 715 ntBASIC21.01■□□□□ 0.95
CDC7O00311 AC110285.6-201ENST00000617652 491 ntBASIC21.01■□□□□ 0.95
CDC7O00311 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
CDC7O00311 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CDC7O00311 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.01■□□□□ 0.95
CDC7O00311 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
CDC7O00311 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC7O00311 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDC7O00311 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDC7O00311 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21■□□□□ 0.95
CDC7O00311 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
CDC7O00311 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21■□□□□ 0.95
CDC7O00311 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21■□□□□ 0.95
CDC7O00311 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21■□□□□ 0.95
CDC7O00311 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21■□□□□ 0.95
CDC7O00311 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21■□□□□ 0.95
CDC7O00311 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21■□□□□ 0.95
CDC7O00311 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CDC7O00311 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDC7O00311 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 AC099791.1-201ENST00000416440 715 ntBASIC20.99■□□□□ 0.95
CDC7O00311 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.99■□□□□ 0.95
CDC7O00311 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDC7O00311 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
CDC7O00311 SMUG1P1-201ENST00000590640 811 ntBASIC20.99■□□□□ 0.95
CDC7O00311 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.99■□□□□ 0.95
CDC7O00311 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.99■□□□□ 0.95
CDC7O00311 Z98882.1-201ENST00000622160 2253 ntBASIC20.99■□□□□ 0.95
CDC7O00311 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CDC7O00311 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.99■□□□□ 0.95
CDC7O00311 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDC7O00311 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC7O00311 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC7O00311 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
CDC7O00311 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC7O00311 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.98■□□□□ 0.95
CDC7O00311 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC7O00311 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.98■□□□□ 0.95
CDC7O00311 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.98■□□□□ 0.95
CDC7O00311 IGHV3-19-201ENST00000521488 291 ntBASIC20.98■□□□□ 0.95
CDC7O00311 AL034346.1-201ENST00000568244 1277 ntBASIC20.98■□□□□ 0.95
CDC7O00311 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.98■□□□□ 0.95
CDC7O00311 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.98■□□□□ 0.95
CDC7O00311 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDC7O00311 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CDC7O00311 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC7O00311 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC7O00311 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.97■□□□□ 0.95
CDC7O00311 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC7O00311 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.97■□□□□ 0.95
CDC7O00311 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC7O00311 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC7O00311 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC7O00311 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDC7O00311 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC7O00311 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.97■□□□□ 0.95
CDC7O00311 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.97■□□□□ 0.95
CDC7O00311 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CDC7O00311 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC7O00311 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.96■□□□□ 0.95
CDC7O00311 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDC7O00311 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.96■□□□□ 0.95
CDC7O00311 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
CDC7O00311 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.95■□□□□ 0.94
CDC7O00311 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDC7O00311 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms