Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TMX2-CTNND1H3BSU7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC004687.1-201ENST00000579003 1625 ntBASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 HLA-L-209ENST00000420110 1011 ntBASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TMX2-CTNND1H3BSU7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC026185.1-201ENST00000445748 174 ntBASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TMX2-CTNND1H3BSU7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 SMUG1P1-201ENST00000590640 811 ntBASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC073111.5-205ENST00000641717 521 ntBASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TMX2-CTNND1H3BSU7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
TMX2-CTNND1H3BSU7 AC004854.2-201ENST00000608450 1441 ntBASIC20.95■□□□□ 0.95
TMX2-CTNND1H3BSU7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 GUSBP5-202ENST00000510805 1989 ntBASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
TMX2-CTNND1H3BSU7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 OXCT2P1-201ENST00000447263 1535 ntBASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 CDCA4P2-201ENST00000441182 718 ntBASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 RAP2CP1-201ENST00000605103 478 ntBASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 AC079630.1-202ENST00000618127 1840 ntBASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.94■□□□□ 0.94
TMX2-CTNND1H3BSU7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 KRT18P61-201ENST00000585825 1298 ntBASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TMX2-CTNND1H3BSU7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMX2-CTNND1H3BSU7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms