Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RNF223E7ERA6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF223E7ERA6 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RNF223E7ERA6 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RNF223E7ERA6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 PRORSD1P-201ENST00000295112 541 ntBASIC17.8■□□□□ 0.44
RNF223E7ERA6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF223E7ERA6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF223E7ERA6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF223E7ERA6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF223E7ERA6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF223E7ERA6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF223E7ERA6 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF223E7ERA6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 AC093323.1-202ENST00000635031 2045 ntBASIC17.79■□□□□ 0.44
RNF223E7ERA6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 LINC01960-201ENST00000563759 1884 ntBASIC17.79■□□□□ 0.44
RNF223E7ERA6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF223E7ERA6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF223E7ERA6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF223E7ERA6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF223E7ERA6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF223E7ERA6 AC093787.1-201ENST00000450396 207 ntBASIC17.78■□□□□ 0.44
RNF223E7ERA6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF223E7ERA6 SLC7A5P1-201ENST00000568957 537 ntBASIC17.78■□□□□ 0.44
RNF223E7ERA6 AC016405.3-201ENST00000607710 860 ntBASIC17.78■□□□□ 0.44
RNF223E7ERA6 OR10C1-204ENST00000622521 1039 ntBASIC17.78■□□□□ 0.44
RNF223E7ERA6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF223E7ERA6 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF223E7ERA6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF223E7ERA6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF223E7ERA6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 AC069236.1-201ENST00000604339 616 ntBASIC17.77■□□□□ 0.44
RNF223E7ERA6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 OR7E47P-201ENST00000546390 1422 ntBASIC17.77■□□□□ 0.44
RNF223E7ERA6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF223E7ERA6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF223E7ERA6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF223E7ERA6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF223E7ERA6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF223E7ERA6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF223E7ERA6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF223E7ERA6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF223E7ERA6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF223E7ERA6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF223E7ERA6 BX276092.2-201ENST00000417668 665 ntBASIC17.76■□□□□ 0.43
RNF223E7ERA6 RPS2P52-201ENST00000469610 820 ntBASIC17.76■□□□□ 0.43
RNF223E7ERA6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RNF223E7ERA6 RARRES2P4-201ENST00000514074 484 ntBASIC17.76■□□□□ 0.43
RNF223E7ERA6 AC092118.2-201ENST00000613495 667 ntBASIC17.76■□□□□ 0.43
RNF223E7ERA6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF223E7ERA6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
RNF223E7ERA6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF223E7ERA6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF223E7ERA6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.75■□□□□ 0.43
RNF223E7ERA6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RNF223E7ERA6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms