Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
C4orf47A7E2U8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 AC055733.4-201ENST00000638462 1354 ntBASIC21.03■□□□□ 0.96
C4orf47A7E2U8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 AC083880.1-201ENST00000608266 535 ntBASIC21.03■□□□□ 0.96
C4orf47A7E2U8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
C4orf47A7E2U8 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C4orf47A7E2U8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.02■□□□□ 0.96
C4orf47A7E2U8 BX276092.2-201ENST00000417668 665 ntBASIC21.02■□□□□ 0.96
C4orf47A7E2U8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.02■□□□□ 0.96
C4orf47A7E2U8 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C4orf47A7E2U8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
C4orf47A7E2U8 AC097658.1-201ENST00000475555 843 ntBASIC21.02■□□□□ 0.96
C4orf47A7E2U8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C4orf47A7E2U8 AC016405.3-201ENST00000607710 860 ntBASIC21.02■□□□□ 0.96
C4orf47A7E2U8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
C4orf47A7E2U8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
C4orf47A7E2U8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 AC128676.1-201ENST00000454392 318 ntBASIC21.01■□□□□ 0.95
C4orf47A7E2U8 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
C4orf47A7E2U8 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C4orf47A7E2U8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21■□□□□ 0.95
C4orf47A7E2U8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
C4orf47A7E2U8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C4orf47A7E2U8 DUSP8P5-201ENST00000422884 1815 ntBASIC21■□□□□ 0.95
C4orf47A7E2U8 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21■□□□□ 0.95
C4orf47A7E2U8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
C4orf47A7E2U8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21■□□□□ 0.95
C4orf47A7E2U8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21■□□□□ 0.95
C4orf47A7E2U8 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21■□□□□ 0.95
C4orf47A7E2U8 AC069236.1-201ENST00000604339 616 ntBASIC21■□□□□ 0.95
C4orf47A7E2U8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
C4orf47A7E2U8 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
C4orf47A7E2U8 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 AL512625.2-201ENST00000417533 625 ntBASIC20.99■□□□□ 0.95
C4orf47A7E2U8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 UNC93B4-201ENST00000505679 747 ntBASIC20.99■□□□□ 0.95
C4orf47A7E2U8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 DUSP8P3-201ENST00000399571 1760 ntBASIC20.99■□□□□ 0.95
C4orf47A7E2U8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
C4orf47A7E2U8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 AC007322.4-201ENST00000509611 723 ntBASIC20.98■□□□□ 0.95
C4orf47A7E2U8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
C4orf47A7E2U8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.97■□□□□ 0.95
C4orf47A7E2U8 MYC-209ENST00000641252 345 ntBASIC20.97■□□□□ 0.95
C4orf47A7E2U8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms