Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCDC189A1A4V9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.33■■□□□ 1
CCDC189A1A4V9 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.33■■□□□ 1
CCDC189A1A4V9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 SRD5A1P1-201ENST00000442297 786 ntBASIC21.32■■□□□ 1
CCDC189A1A4V9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.32■■□□□ 1
CCDC189A1A4V9 AC079089.2-201ENST00000531211 1277 ntBASIC21.32■■□□□ 1
CCDC189A1A4V9 AC099791.2-201ENST00000605725 427 ntBASIC21.32■■□□□ 1
CCDC189A1A4V9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.32■■□□□ 1
CCDC189A1A4V9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCDC189A1A4V9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.32■■□□□ 1
CCDC189A1A4V9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.31■■□□□ 1
CCDC189A1A4V9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
CCDC189A1A4V9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.31■■□□□ 1
CCDC189A1A4V9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 AL138724.1-201ENST00000606771 1088 ntBASIC21.31■■□□□ 1
CCDC189A1A4V9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCDC189A1A4V9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.31■■□□□ 1
CCDC189A1A4V9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CCDC189A1A4V9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CCDC189A1A4V9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.3■■□□□ 1
CCDC189A1A4V9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
CCDC189A1A4V9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 AC006455.2-201ENST00000429931 906 ntBASIC21.3■■□□□ 1
CCDC189A1A4V9 MIR3181-201ENST00000578512 73 ntBASIC21.3■■□□□ 1
CCDC189A1A4V9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.3■■□□□ 1
CCDC189A1A4V9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.3■■□□□ 1
CCDC189A1A4V9 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.3■■□□□ 1
CCDC189A1A4V9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.3■■□□□ 1
CCDC189A1A4V9 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
CCDC189A1A4V9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CCDC189A1A4V9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CCDC189A1A4V9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
CCDC189A1A4V9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.29■■□□□ 1
CCDC189A1A4V9 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.29■■□□□ 1
CCDC189A1A4V9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 AL020996.1-203ENST00000536896 2307 ntBASIC21.29■■□□□ 1
CCDC189A1A4V9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CCDC189A1A4V9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
CCDC189A1A4V9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC189A1A4V9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC189A1A4V9 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC189A1A4V9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.28■■□□□ 1
CCDC189A1A4V9 DUX4L19-201ENST00000557448 1267 ntBASIC21.28■■□□□ 1
CCDC189A1A4V9 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.28■■□□□ 1
CCDC189A1A4V9 AL512631.2-201ENST00000604634 923 ntBASIC21.28■■□□□ 1
CCDC189A1A4V9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC189A1A4V9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC189A1A4V9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.28■■□□□ 1
CCDC189A1A4V9 AC026471.1-201ENST00000564629 3026 ntBASIC21.28■■□□□ 1
CCDC189A1A4V9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC189A1A4V9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.27■■□□□ 1
CCDC189A1A4V9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCDC189A1A4V9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.27■■□□□ 1
CCDC189A1A4V9 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC189A1A4V9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC189A1A4V9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.27■■□□□ 1
CCDC189A1A4V9 AC087239.1-201ENST00000622671 572 ntBASIC21.27■■□□□ 1
CCDC189A1A4V9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC189A1A4V9 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.27■■□□□ 1
CCDC189A1A4V9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.27■■□□□ 1
CCDC189A1A4V9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC189A1A4V9 AC010542.4-201ENST00000563151 1910 ntBASIC21.27■■□□□ 1
CCDC189A1A4V9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC189A1A4V9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.27■□□□□ 0.99
CCDC189A1A4V9 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms