Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 AC021242.3-201ENST00000607598 1377 ntBASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
DUXBA0A1W2PPF3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 TSPY13P-201ENST00000338964 914 ntBASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 AC092667.1-201ENST00000434301 2586 ntBASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
DUXBA0A1W2PPF3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 AC103724.3-201ENST00000564481 992 ntBASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
DUXBA0A1W2PPF3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 YBX1P4-201ENST00000392794 808 ntBASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 AC026471.6-201ENST00000622954 1905 ntBASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 AL049796.1-201ENST00000565336 1766 ntBASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 FEM1AP1-201ENST00000431297 1995 ntBASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
DUXBA0A1W2PPF3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 AC068587.7-201ENST00000641602 218 ntBASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
DUXBA0A1W2PPF3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.4■□□□□ 0.38
DUXBA0A1W2PPF3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms