Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-4A0A0C4DH59 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-4A0A0C4DH59 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRBV5-4A0A0C4DH59 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.19■□□□□ 0.98
TRBV5-4A0A0C4DH59 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 AC003102.1-202ENST00000563394 1796 ntBASIC21.18■□□□□ 0.98
TRBV5-4A0A0C4DH59 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.17■□□□□ 0.98
TRBV5-4A0A0C4DH59 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 AC123595.1-201ENST00000440769 1046 ntBASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.16■□□□□ 0.98
TRBV5-4A0A0C4DH59 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV5-4A0A0C4DH59 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRBV5-4A0A0C4DH59 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TRBV5-4A0A0C4DH59 YBX1P1-201ENST00000445822 960 ntBASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 FBXW4P1-201ENST00000426721 2239 ntBASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV5-4A0A0C4DH59 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 AC019069.1-201ENST00000610008 1333 ntBASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.13■□□□□ 0.97
TRBV5-4A0A0C4DH59 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.12■□□□□ 0.97
TRBV5-4A0A0C4DH59 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-4A0A0C4DH59 LINC02228-203ENST00000641970 1355 ntBASIC21.11■□□□□ 0.97
TRBV5-4A0A0C4DH59 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.11■□□□□ 0.97
TRBV5-4A0A0C4DH59 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV5-4A0A0C4DH59 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms