Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 AP005435.1-201ENST00000529293 1178 ntBASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 FBXW4P1-201ENST00000426721 2239 ntBASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRAV4A0A0B4J268 FAM99A-202ENST00000538190 1989 ntBASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 SLC47A1P1-202ENST00000449666 945 ntBASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRAV4A0A0B4J268 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.37■□□□□ 0.05
TRAV4A0A0B4J268 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 AL034346.1-201ENST00000568244 1277 ntBASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRAV4A0A0B4J268 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 GOLGA2P6-201ENST00000340929 2049 ntBASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 SNX3-202ENST00000349379 890 ntTSL 2 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.35■□□□□ 0.05
TRAV4A0A0B4J268 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms