Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 PDGFD-201ENST00000302251 4052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 DPY19L2-202ENST00000324472 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 MEOX1-201ENST00000318579 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 AC087741.1-201ENST00000570309 4399 ntBASIC12.42□□□□□ -0.42
LMO3Q8TAP4 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 RCVRN-201ENST00000226193 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 TGS1-201ENST00000260129 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 POTEB2-202ENST00000454856 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 AL645504.1-201ENST00000429443 1809 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 ZNF781-203ENST00000590008 2148 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 LPIN1-203ENST00000396098 1761 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 GTF2I-218ENST00000620879 4352 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 MUC21-202ENST00000486149 2527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 RPL15-210ENST00000456530 2835 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 PRPH2-201ENST00000230381 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 SRC-203ENST00000373567 4321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 CA13-201ENST00000321764 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 GLULP4-201ENST00000324731 1122 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 RPLP0-203ENST00000392514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AL356583.3-201ENST00000412354 417 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AC007322.2-201ENST00000414540 605 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 GAPDHP65-201ENST00000425487 1006 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 ADORA2BP1-201ENST00000429195 842 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AL117382.1-201ENST00000438702 754 ntTSL 5 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AL589843.2-201ENST00000445872 1262 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AL158824.1-201ENST00000451825 450 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AL132656.1-201ENST00000452173 490 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 MRPS22-202ENST00000465056 1099 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 TNS2-204ENST00000546602 4429 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 TMEM263-202ENST00000547081 833 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 PINLYP-203ENST00000562255 569 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 PPCDC-210ENST00000568649 926 ntTSL 5 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 TCF4-AS1-201ENST00000587660 396 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AL356423.1-201ENST00000604953 538 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 FAM236A-202ENST00000611003 403 ntAPPRIS P5 TSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 COG1-210ENST00000618996 3369 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 SALL2-207ENST00000614342 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AC106865.1-202ENST00000507055 2292 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 CORO1C-201ENST00000261401 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 PAAF1-210ENST00000541951 1383 ntTSL 2 BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 FAM90A28P-202ENST00000597191 1374 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 AC073476.3-201ENST00000563949 2507 ntBASIC12.41□□□□□ -0.42
LMO3Q8TAP4 EPC1-201ENST00000263062 2913 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 CREB3L4-205ENST00000368607 1752 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
LMO3Q8TAP4 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 BMS1P4-201ENST00000441263 1332 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 UGT1A8-201ENST00000373450 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 MAP3K3-208ENST00000579585 3352 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AC093525.7-201ENST00000569852 3626 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 PCDHB12-201ENST00000239450 3853 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 C3orf20-201ENST00000253697 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 TCF4-204ENST00000457482 2372 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 APBA2-202ENST00000411764 3599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 SNAPC5-201ENST00000307979 794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 RPS6-201ENST00000315377 863 ntTSL 3 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AC111200.1-201ENST00000358778 657 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 RNA5SP469-201ENST00000364165 109 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 OR13C5-201ENST00000374779 957 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AL160270.2-201ENST00000441226 473 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 BRD9P2-201ENST00000506203 239 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AC069120.3-201ENST00000519764 537 ntTSL 4 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 TMA16P1-201ENST00000529148 618 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 SAA2-205ENST00000529528 610 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AC008567.1-201ENST00000567299 1192 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AC136944.3-202ENST00000567422 509 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AC090844.3-202ENST00000584649 535 ntTSL 4 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 NAMA-205ENST00000605043 551 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 PINLYP-207ENST00000612042 914 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 PRSS1-207ENST00000619214 787 ntTSL 5 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 AC099552.4-201ENST00000624248 949 ntBASIC12.4□□□□□ -0.42
LMO3Q8TAP4 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC12.4□□□□□ -0.42
LMO3Q8TAP4 POM121L9P-201ENST00000414583 5018 ntTSL 2 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms