Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC28A1-204ENST00000538177 2155 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 ACTN3-201ENST00000502692 3084 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 KIF28P-202ENST00000504864 3064 ntBASIC12.44□□□□□ -0.42
LMO3Q8TAP4 RAB39B-201ENST00000369454 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 AL512310.2-201ENST00000547175 1493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 LINC02297-201ENST00000548050 1493 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 AL121900.1-201ENST00000428285 1695 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 ATAD3C-201ENST00000378785 3859 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 MYO15A-203ENST00000418233 3411 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 TNS2-210ENST00000549700 4525 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 ZER1-201ENST00000291900 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 ZNF438-205ENST00000436087 3164 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 CTNNA2-219ENST00000629316 3167 ntTSL 2 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 IGSF5-201ENST00000380588 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 SMPD4P2-201ENST00000440167 1634 ntBASIC12.44□□□□□ -0.42
LMO3Q8TAP4 AC008575.2-202ENST00000506997 1643 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 CCDC112-206ENST00000512261 2279 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 SUPT7L-204ENST00000406540 2869 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
LMO3Q8TAP4 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 ZC4H2-202ENST00000374839 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AC142384.1-201ENST00000566346 1549 ntBASIC12.43□□□□□ -0.42
LMO3Q8TAP4 ZNF44-203ENST00000356109 2706 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 SLC45A4-202ENST00000517878 3470 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 LRIT2-201ENST00000372113 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 EFCAB6-AS1-201ENST00000431327 2656 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 TRAF3IP3-205ENST00000400959 1854 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 UCP1-201ENST00000262999 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 UQCRH-201ENST00000311672 604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 MIR181D-201ENST00000384853 137 ntBASIC12.43□□□□□ -0.42
LMO3Q8TAP4 RPSAP45-201ENST00000401872 874 ntBASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AC026884.1-201ENST00000418296 457 ntBASIC12.43□□□□□ -0.42
LMO3Q8TAP4 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 C12orf71-201ENST00000429849 957 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AC007163.1-201ENST00000447972 877 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 PFN1P10-201ENST00000455962 327 ntBASIC12.43□□□□□ -0.42
LMO3Q8TAP4 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 CD63-207ENST00000548898 727 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 CD63-212ENST00000552067 621 ntTSL 5 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AC010328.3-201ENST00000600068 553 ntTSL 4 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AAGAB-201ENST00000261880 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 LINC01600-201ENST00000624527 2434 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 ATP11AUN-201ENST00000623100 2241 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 PRAMENP-203ENST00000548391 1445 ntBASIC12.43□□□□□ -0.42
LMO3Q8TAP4 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 TBC1D28-202ENST00000405044 1978 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 LINC00052-201ENST00000560153 1966 ntTSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 OC90-201ENST00000254627 1782 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 PRAMEF7-201ENST00000330881 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 KPRP-201ENST00000606109 2492 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
LMO3Q8TAP4 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 RFFL-205ENST00000415395 1706 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 LINC01278-204ENST00000609143 2768 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 P4HA3-AS1-201ENST00000502071 2157 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 PFN1P2-201ENST00000604437 1834 ntBASIC12.42□□□□□ -0.42
LMO3Q8TAP4 GPR85-204ENST00000449591 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 UGT3A1-202ENST00000333811 1114 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 IGLV1-50-201ENST00000390291 405 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 MARK3P3-201ENST00000484446 727 ntBASIC12.42□□□□□ -0.42
LMO3Q8TAP4 ZBED3-AS1-206ENST00000508401 582 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 AC008429.1-201ENST00000520067 966 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 ADM-204ENST00000526492 641 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 HNRNPA1P72-201ENST00000529511 967 ntBASIC12.42□□□□□ -0.42
LMO3Q8TAP4 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 AC090616.6-202ENST00000583601 1088 ntBASIC12.42□□□□□ -0.42
LMO3Q8TAP4 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 MIR6871-201ENST00000613433 56 ntBASIC12.42□□□□□ -0.42
LMO3Q8TAP4 PGM2-206ENST00000625312 661 ntTSL 2 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 CIDECP-204ENST00000432401 1794 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 ITGB6-204ENST00000409967 2292 ntTSL 3 BASIC12.42□□□□□ -0.42
LMO3Q8TAP4 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms