Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 TCTN3-204ENST00000430368 1778 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 SIN3A-208ENST00000567289 4078 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SLC1A1P43005 OR4C12-201ENST00000335238 1063 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
SLC1A1P43005 RBM14-203ENST00000409372 876 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC12.29□□□□□ -0.44
SLC1A1P43005 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 AC034229.1-201ENST00000506299 943 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 ISL1-203ENST00000511384 981 ntTSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 EMSY-217ENST00000533988 934 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC12.29□□□□□ -0.44
SLC1A1P43005 AC104996.2-201ENST00000583091 1000 ntBASIC12.29□□□□□ -0.44
SLC1A1P43005 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC12.29□□□□□ -0.44
SLC1A1P43005 KIAA1683-206ENST00000600328 3819 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 NTNG1-207ENST00000370073 3347 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 FOXP1-205ENST00000468577 1842 ntTSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC12.29□□□□□ -0.44
SLC1A1P43005 NAP1L1-206ENST00000544816 1597 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 MELK-209ENST00000541717 2363 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 ZFAT-208ENST00000520356 4273 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 SFI1-203ENST00000400288 4002 ntAPPRIS P4 TSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 SLCO2B1-204ENST00000454962 3219 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 FHIT-204ENST00000468189 1634 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 PAPSS1-201ENST00000265174 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 COQ10A-203ENST00000546544 1369 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
SLC1A1P43005 AL109618.1-201ENST00000434910 1683 ntBASIC12.29□□□□□ -0.44
SLC1A1P43005 YAF2-219ENST00000555248 5095 ntTSL 2 BASIC12.29□□□□□ -0.44
SLC1A1P43005 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 PARD3B-202ENST00000351153 3411 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 DOCK2-201ENST00000256935 6097 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 TTLL5-202ENST00000298832 4683 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 AC234775.2-201ENST00000392722 1792 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 VRK3-223ENST00000601341 1777 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 TRAFD1-202ENST00000412615 2697 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 PARD3B-201ENST00000349953 3315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 C8orf44-203ENST00000519561 1835 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 MED6-202ENST00000430055 1507 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 NRAP-203ENST00000369358 5534 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 LPIN1-209ENST00000449576 3077 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 AC004801.4-201ENST00000546738 3112 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 AC007741.1-201ENST00000623818 3495 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 KLK8-203ENST00000347619 555 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 SMIM21-201ENST00000382638 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 FAM238B-202ENST00000423917 1220 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC1A1P43005 PIN1P1-202ENST00000439639 301 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 AL357060.2-204ENST00000448942 963 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC1A1P43005 AC008021.1-201ENST00000474180 414 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 MTND6P4-201ENST00000506002 522 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 RBMXP4-201ENST00000507797 1134 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 PRR4-203ENST00000535024 889 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SLC1A1P43005 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC12.28□□□□□ -0.44
SLC1A1P43005 CISTR-201ENST00000570015 581 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 RN7SL440P-201ENST00000577855 343 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 AC005154.1-204ENST00000580902 926 ntTSL 4 BASIC12.28□□□□□ -0.44
SLC1A1P43005 CNDP2-228ENST00000584768 897 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 CISTR-202ENST00000626733 464 ntTSL 3 BASIC12.28□□□□□ -0.44
SLC1A1P43005 AC093323.2-201ENST00000632154 976 ntBASIC12.28□□□□□ -0.44
SLC1A1P43005 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 C15orf39-201ENST00000360639 4517 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 FAM177A1-203ENST00000396472 3254 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SLC1A1P43005 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 ZFP37-202ENST00000553380 1969 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SLC1A1P43005 AP000911.1-203ENST00000529070 1673 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 KRT7-AS-201ENST00000546686 1693 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 BCORL1-205ENST00000540052 7127 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 DIRAS1-201ENST00000323469 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 SCNN1B-201ENST00000307331 2085 ntTSL 5 BASIC12.28□□□□□ -0.44
SLC1A1P43005 AC068473.3-202ENST00000589723 4167 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 HAUS5-201ENST00000203166 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SLC1A1P43005 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SLC1A1P43005 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SLC1A1P43005 DPP9-201ENST00000262960 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SLC1A1P43005 RBM33-207ENST00000401878 10149 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
SLC1A1P43005 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.44
SLC1A1P43005 IL19-204ENST00000620365 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SLC1A1P43005 ATP6V1E2-201ENST00000306448 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SLC1A1P43005 MYO7A-211ENST00000620575 4016 ntTSL 5 BASIC12.27□□□□□ -0.44
SLC1A1P43005 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SLC1A1P43005 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC1A1P43005 BICD1-201ENST00000281474 3281 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC1A1P43005 SEMA6A-205ENST00000503865 1678 ntTSL 2 BASIC12.27□□□□□ -0.45
SLC1A1P43005 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC1A1P43005 FAIM2-201ENST00000320634 4654 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC1A1P43005 SNRNP35-201ENST00000350887 942 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SLC1A1P43005 HNRNPA1P6-201ENST00000394002 1117 ntBASIC12.27□□□□□ -0.45
SLC1A1P43005 RFPL3S-203ENST00000400234 1295 ntAPPRIS P5 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC1A1P43005 MKL1-204ENST00000402630 747 ntTSL 2 BASIC12.27□□□□□ -0.45
SLC1A1P43005 SNRNP35-202ENST00000412157 1140 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SLC1A1P43005 AC253536.2-201ENST00000423307 254 ntBASIC12.27□□□□□ -0.45
SLC1A1P43005 FRG2B-201ENST00000425520 890 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SLC1A1P43005 AL590440.1-201ENST00000436960 428 ntTSL 2 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 627.6 ms