Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LINC00327-201ENST00000443778 2087 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 REXO1L1P-201ENST00000379010 6598 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 GABRA5-201ENST00000335625 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 MED29-207ENST00000615911 3565 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 LYPD4-201ENST00000343055 1051 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 RNA5SP324-201ENST00000365177 108 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 LYZL2-201ENST00000375318 818 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 FAM96A-202ENST00000380290 826 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC078962.1-201ENST00000444853 281 ntTSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC006965.1-201ENST00000445747 959 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AL645924.1-201ENST00000502641 220 ntTSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 MEG3-223ENST00000524131 721 ntTSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC008740.1-201ENST00000549658 255 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC026826.2-201ENST00000560455 214 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC137932.1-201ENST00000563087 410 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AP002478.2-201ENST00000584060 557 ntTSL 4 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 MIR5193-201ENST00000584510 109 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 LYPD4-202ENST00000601246 1076 ntTSL 5 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 PAX8-AS1-217ENST00000617509 627 ntTSL 4 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AC026401.3-201ENST00000624682 882 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 LRP2-202ENST00000443831 4007 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 B3GAT2-202ENST00000615536 5206 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 CDCA8-201ENST00000327331 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 MASP1-201ENST00000169293 2440 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 STAM-AS1-201ENST00000563601 2595 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 PAPSS1-201ENST00000265174 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 AL713866.1-201ENST00000563320 3125 ntBASIC12.5□□□□□ -0.41
LMO3Q8TAP4 MED24-201ENST00000356271 3446 ntTSL 2 BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 DENND2A-210ENST00000537639 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LMO3Q8TAP4 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 IRAK2-201ENST00000256458 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 TYK2-202ENST00000524462 3456 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 MIR100HG-212ENST00000531381 3370 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 FAM177A1-203ENST00000396472 3254 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 CWC25-202ENST00000614790 3234 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 ADGRE5-202ENST00000357355 3054 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 DNAJC2-204ENST00000412522 3033 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 MROH7-204ENST00000409996 2977 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 RNF10-203ENST00000413266 2671 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 FCRL3-202ENST00000368186 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 C11orf54-214ENST00000540113 2442 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 LINC02170-202ENST00000562231 2218 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 FAM239C-201ENST00000381105 2118 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 SCNN1B-201ENST00000307331 2085 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 ZC3HC1-201ENST00000311873 2017 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 POLR3C-201ENST00000334163 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AC114811.2-201ENST00000569927 5647 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 BMPR1B-208ENST00000515059 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 FCRLA-206ENST00000367949 1792 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 SERPINA1-204ENST00000402629 1450 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AL139424.2-202ENST00000641335 1369 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 SULT1A2-201ENST00000335715 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AL353133.2-201ENST00000402173 411 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 ACTR3-202ENST00000415792 676 ntTSL 3 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AL627313.1-201ENST00000428860 238 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 KRT19P3-201ENST00000507547 828 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AC091114.1-202ENST00000521991 785 ntTSL 2 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AC087222.1-201ENST00000571113 504 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AC091588.2-201ENST00000578741 366 ntTSL 3 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 MIR3943-201ENST00000585069 100 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 AP000345.2-201ENST00000608615 1081 ntTSL 3 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 Metazoa_SRP.194-201ENST00000612213 283 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 MIR6165-201ENST00000614803 84 ntBASIC12.49□□□□□ -0.41
LMO3Q8TAP4 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 ALDH3A2-219ENST00000579855 3583 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 NLRP1-202ENST00000269280 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LMO3Q8TAP4 SPART-203ENST00000451493 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms