Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SETD4-202ENST00000399201 1212 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 SETD4-203ENST00000399205 1208 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 TDGF1P2-201ENST00000413322 562 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 LATS2-AS1-201ENST00000422510 632 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 AC106875.1-202ENST00000435175 1170 ntTSL 3 BASIC12.38□□□□□ -0.43
MTHFRP42898 Z98885.1-201ENST00000444011 465 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 AC005297.3-201ENST00000446214 756 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 THOC7-204ENST00000469584 836 ntTSL 2 BASIC12.38□□□□□ -0.43
MTHFRP42898 TMEM255B-205ENST00000488362 694 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
MTHFRP42898 AC108174.1-201ENST00000504916 745 ntTSL 3 BASIC12.38□□□□□ -0.43
MTHFRP42898 IGKV1-13-201ENST00000521705 347 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 MAJIN-204ENST00000530444 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 PPP2R5C-224ENST00000556946 735 ntTSL 2 BASIC12.38□□□□□ -0.43
MTHFRP42898 AC051619.8-201ENST00000563103 308 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 AC243830.1-201ENST00000610398 455 ntTSL 3 BASIC12.38□□□□□ -0.43
MTHFRP42898 Metazoa_SRP.56-201ENST00000612077 279 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 pRNA.10-201ENST00000613590 89 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 DUXAP10-206ENST00000614614 712 ntTSL 3 BASIC12.38□□□□□ -0.43
MTHFRP42898 TARDBP-202ENST00000315091 1835 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 SGO1-AS1-204ENST00000634618 2371 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 FAM90A3P-201ENST00000506444 1395 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 FAM90A4P-201ENST00000509856 1395 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 FAM90A18P-201ENST00000527117 1395 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 FAM90A20P-201ENST00000528221 1395 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 FAM90A10P-201ENST00000530206 1395 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 FAM90A19P-201ENST00000533611 1395 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 AP002360.1-203ENST00000321844 5363 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 PPP1R12B-201ENST00000290419 2227 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 AL390728.2-201ENST00000400933 1670 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 ELP4-207ENST00000638347 1651 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 MTMR2-202ENST00000352297 3350 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 ZNF542P-207ENST00000495307 3393 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC12.38□□□□□ -0.43
MTHFRP42898 KCNMA1-289ENST00000640807 3387 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 AL354796.1-201ENST00000623292 1951 ntBASIC12.38□□□□□ -0.43
MTHFRP42898 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
MTHFRP42898 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
MTHFRP42898 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 TM2D3-202ENST00000347970 1329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 AC074091.1-201ENST00000505973 1741 ntTSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 CDK20-203ENST00000375871 1907 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 AC122688.3-201ENST00000623804 3467 ntBASIC12.37□□□□□ -0.43
MTHFRP42898 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 PROSER2-AS1-201ENST00000445498 3146 ntTSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 ZNF140-201ENST00000319849 596 ntTSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 ACTG1P18-201ENST00000401561 1143 ntBASIC12.37□□□□□ -0.43
MTHFRP42898 RPSAP45-201ENST00000401872 874 ntBASIC12.37□□□□□ -0.43
MTHFRP42898 KRTAP13-5P-201ENST00000418755 499 ntBASIC12.37□□□□□ -0.43
MTHFRP42898 SNHG15-201ENST00000438705 509 ntTSL 3 BASIC12.37□□□□□ -0.43
MTHFRP42898 AC108025.2-201ENST00000455579 1199 ntTSL 3 BASIC12.37□□□□□ -0.43
MTHFRP42898 Z93930.2-201ENST00000458080 505 ntTSL 3 BASIC12.37□□□□□ -0.43
MTHFRP42898 AC004590.1-201ENST00000502435 510 ntTSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 NDUFS8-210ENST00000528492 353 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 SAA2-205ENST00000529528 610 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 C10orf113-202ENST00000534331 579 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 C19orf54-209ENST00000598485 553 ntTSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 DSTYK-203ENST00000615388 1042 ntTSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 AC242842.1-201ENST00000617712 447 ntTSL 3 BASIC12.37□□□□□ -0.43
MTHFRP42898 AC012065.5-201ENST00000624084 510 ntBASIC12.37□□□□□ -0.43
MTHFRP42898 AL139353.3-201ENST00000635085 411 ntBASIC12.37□□□□□ -0.43
MTHFRP42898 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 NOMO2-210ENST00000620440 1360 ntTSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 CHI3L2-202ENST00000369748 1468 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 WWP2-202ENST00000359154 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 KDM6A-201ENST00000377967 5438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC12.37□□□□□ -0.43
MTHFRP42898 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 KDM4E-201ENST00000450979 2339 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
MTHFRP42898 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 MRGPRX2-201ENST00000329773 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
MTHFRP42898 TRIM49B-201ENST00000332682 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
MTHFRP42898 NDUFA5-212ENST00000618945 1432 ntTSL 2 BASIC12.37□□□□□ -0.43
MTHFRP42898 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms