Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD3-BMI1R4GMX3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
COMMD3-BMI1R4GMX3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.09■□□□□ 0.81
COMMD3-BMI1R4GMX3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.08■□□□□ 0.81
COMMD3-BMI1R4GMX3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.08■□□□□ 0.8
COMMD3-BMI1R4GMX3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
COMMD3-BMI1R4GMX3 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
COMMD3-BMI1R4GMX3 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 AC012354.3-201ENST00000623734 483 ntBASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
COMMD3-BMI1R4GMX3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
COMMD3-BMI1R4GMX3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
COMMD3-BMI1R4GMX3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 MIR4508-201ENST00000584178 70 ntBASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
COMMD3-BMI1R4GMX3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
COMMD3-BMI1R4GMX3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
COMMD3-BMI1R4GMX3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms