Protein–RNA interactions for Protein: Q9Y6G3

MRPL42, 39S ribosomal protein L42, mitochondrial, humanhuman

Known RBP Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42Q9Y6G3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 MIR4651-201ENST00000582622 73 ntBASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 AC066615.1-201ENST00000640911 628 ntBASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MRPL42Q9Y6G3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MRPL42Q9Y6G3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 AC069152.1-201ENST00000438030 544 ntBASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 AC010141.2-201ENST00000452426 721 ntBASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MRPL42Q9Y6G3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MRPL42Q9Y6G3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.16■■□□□ 1.3
MRPL42Q9Y6G3 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MRPL42Q9Y6G3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
MRPL42Q9Y6G3 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
MRPL42Q9Y6G3 AF201337.1-201ENST00000520239 748 ntBASIC23.16■■□□□ 1.3
MRPL42Q9Y6G3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
MRPL42Q9Y6G3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 AC079089.2-201ENST00000531211 1277 ntBASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 AC098934.4-201ENST00000564127 592 ntBASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 AC105036.2-201ENST00000569468 176 ntBASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 AC010536.3-201ENST00000620306 533 ntBASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
MRPL42Q9Y6G3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MRPL42Q9Y6G3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
MRPL42Q9Y6G3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
MRPL42Q9Y6G3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 AC138907.5-202ENST00000569484 235 ntBASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
MRPL42Q9Y6G3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 ANOS2P-203ENST00000472227 1816 ntBASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 AC133552.2-202ENST00000575694 574 ntBASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MRPL42Q9Y6G3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 AC133041.1-202ENST00000642053 222 ntBASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
MRPL42Q9Y6G3 AP004607.7-201ENST00000527152 1677 ntBASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms