Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGB6Q9Y5F9 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGB6Q9Y5F9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4L2-201ENST00000561772 1275 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4L6-201ENST00000626483 1275 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4L1-201ENST00000627662 1275 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4L8-201ENST00000629013 1275 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4L3-201ENST00000630187 1275 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4L7-201ENST00000630678 1275 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 DUX4L5-201ENST00000630834 1275 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 AL031602.1-201ENST00000633169 911 ntBASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHGB6Q9Y5F9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 KRT18P5-201ENST00000436075 1291 ntBASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 LINC02228-203ENST00000641970 1355 ntBASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHGB6Q9Y5F9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 TERF1P2-201ENST00000583350 1212 ntBASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PCDHGB6Q9Y5F9 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGB6Q9Y5F9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
PCDHGB6Q9Y5F9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
PCDHGB6Q9Y5F9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
PCDHGB6Q9Y5F9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 ESRRAP2-201ENST00000418437 1549 ntBASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 MIR6084-201ENST00000622012 110 ntBASIC20.14■□□□□ 0.81
PCDHGB6Q9Y5F9 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms