Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.81■■□□□ 1.08
PCDHB9Q9Y5E1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB9Q9Y5E1 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PCDHB9Q9Y5E1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.8■■□□□ 1.08
PCDHB9Q9Y5E1 GUSBP5-202ENST00000510805 1989 ntBASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PCDHB9Q9Y5E1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PCDHB9Q9Y5E1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 AC137761.2-201ENST00000561729 223 ntBASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 AC145350.3-201ENST00000569033 163 ntBASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHB9Q9Y5E1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.77■■□□□ 1.07
PCDHB9Q9Y5E1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB9Q9Y5E1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PCDHB9Q9Y5E1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHB9Q9Y5E1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 BX005040.4-201ENST00000637145 1518 ntBASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHB9Q9Y5E1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 AC242852.2-201ENST00000615738 1807 ntBASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHB9Q9Y5E1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms