Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
RTCBQ9Y3I0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 AC093787.1-201ENST00000450396 207 ntBASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 RPS2P52-201ENST00000469610 820 ntBASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 AC008694.1-202ENST00000636953 945 ntBASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC27.35■■□□□ 1.97
RTCBQ9Y3I0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 AL512625.2-201ENST00000417533 625 ntBASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 EEF1DP3-203ENST00000566025 782 ntBASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
RTCBQ9Y3I0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RTCBQ9Y3I0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 RARRES2P4-201ENST00000514074 484 ntBASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 AC069236.1-201ENST00000604339 616 ntBASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 AC016405.3-201ENST00000607710 860 ntBASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
RTCBQ9Y3I0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 AC098590.1-201ENST00000468126 897 ntBASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 AC053503.5-201ENST00000601508 636 ntBASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
RTCBQ9Y3I0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 DUSP5P2-201ENST00000426873 1033 ntBASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 LINC01960-201ENST00000563759 1884 ntBASIC27.3■■□□□ 1.96
RTCBQ9Y3I0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTCBQ9Y3I0 BX276092.2-201ENST00000417668 665 ntBASIC27.29■■□□□ 1.96
RTCBQ9Y3I0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC27.29■■□□□ 1.96
RTCBQ9Y3I0 AC083880.1-201ENST00000608266 535 ntBASIC27.29■■□□□ 1.96
RTCBQ9Y3I0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC27.29■■□□□ 1.96
RTCBQ9Y3I0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.29■■□□□ 1.96
RTCBQ9Y3I0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
RTCBQ9Y3I0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms