Protein–RNA interactions for Protein: Q9Y2K5

R3HDM2, R3H domain-containing protein 2, humanhuman

Known RBP Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2Q9Y2K5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 AC010141.3-201ENST00000456659 717 ntBASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 AC068587.7-201ENST00000641602 218 ntBASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
R3HDM2Q9Y2K5 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.21■■□□□ 1.15
R3HDM2Q9Y2K5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
R3HDM2Q9Y2K5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.21■■□□□ 1.15
R3HDM2Q9Y2K5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.21■■□□□ 1.15
R3HDM2Q9Y2K5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.21■■□□□ 1.15
R3HDM2Q9Y2K5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.21■■□□□ 1.15
R3HDM2Q9Y2K5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
R3HDM2Q9Y2K5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
R3HDM2Q9Y2K5 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 AC092171.4-201ENST00000609130 632 ntBASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
R3HDM2Q9Y2K5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
R3HDM2Q9Y2K5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 OXCT2P1-201ENST00000447263 1535 ntBASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
R3HDM2Q9Y2K5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 SYT6-210ENST00000641643 1587 ntBASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 SLC47A1P1-202ENST00000449666 945 ntBASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 AC131281.2-201ENST00000520478 145 ntBASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 AC087239.1-201ENST00000622671 572 ntBASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.17■■□□□ 1.14
R3HDM2Q9Y2K5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 MFF-203ENST00000349901 1716 ntTSL 2 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
R3HDM2Q9Y2K5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
R3HDM2Q9Y2K5 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms