Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA1Q9UND3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 ESRRAP2-201ENST00000418437 1549 ntBASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 AC016769.1-201ENST00000409132 1010 ntBASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA1Q9UND3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
NPIPA1Q9UND3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NPIPA1Q9UND3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 AL117328.2-201ENST00000624617 1940 ntBASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 AC137761.2-201ENST00000561729 223 ntBASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 AC145350.3-201ENST00000569033 163 ntBASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 SMUG1P1-201ENST00000590640 811 ntBASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA1Q9UND3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 KRT18P61-201ENST00000585825 1298 ntBASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA1Q9UND3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NPIPA1Q9UND3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 OXCT2P1-201ENST00000447263 1535 ntBASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 AC004854.2-201ENST00000608450 1441 ntBASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NPIPA1Q9UND3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NPIPA1Q9UND3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms