Protein–RNA interactions for Protein: Q9UKG1

APPL1, DCC-interacting protein 13-alpha, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPL1Q9UKG1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
APPL1Q9UKG1 AC139530.1-201ENST00000575312 1977 ntBASIC21.65■■□□□ 1.06
APPL1Q9UKG1 AC080038.3-201ENST00000623346 1952 ntBASIC21.65■■□□□ 1.06
APPL1Q9UKG1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
APPL1Q9UKG1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
APPL1Q9UKG1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
APPL1Q9UKG1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.64■■□□□ 1.05
APPL1Q9UKG1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.64■■□□□ 1.05
APPL1Q9UKG1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
APPL1Q9UKG1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
APPL1Q9UKG1 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 ECEL1P1-201ENST00000373592 1742 ntBASIC21.63■■□□□ 1.05
APPL1Q9UKG1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.63■■□□□ 1.05
APPL1Q9UKG1 PKD1P6-201ENST00000343738 4769 ntBASIC21.63■■□□□ 1.05
APPL1Q9UKG1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
APPL1Q9UKG1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
APPL1Q9UKG1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 YBX1P1-201ENST00000445822 960 ntBASIC21.61■■□□□ 1.05
APPL1Q9UKG1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 AL358852.1-201ENST00000623174 1268 ntBASIC21.61■■□□□ 1.05
APPL1Q9UKG1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
APPL1Q9UKG1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 LINC00526-201ENST00000581067 1875 ntBASIC21.6■■□□□ 1.05
APPL1Q9UKG1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 OR7E47P-201ENST00000546390 1422 ntBASIC21.6■■□□□ 1.05
APPL1Q9UKG1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
APPL1Q9UKG1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms