Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
DUX4Q9UBX2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.71■□□□□ 0.59
DUX4Q9UBX2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DUX4Q9UBX2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.71■□□□□ 0.59
DUX4Q9UBX2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
DUX4Q9UBX2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DUX4Q9UBX2 AC242852.2-201ENST00000615738 1807 ntBASIC18.71■□□□□ 0.59
DUX4Q9UBX2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
DUX4Q9UBX2 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
DUX4Q9UBX2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
DUX4Q9UBX2 AC008406.3-201ENST00000620001 1374 ntBASIC18.7■□□□□ 0.58
DUX4Q9UBX2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.7■□□□□ 0.58
DUX4Q9UBX2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 RNF165-205ENST00000588679 2904 ntBASIC18.69■□□□□ 0.58
DUX4Q9UBX2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.69■□□□□ 0.58
DUX4Q9UBX2 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 AC006455.2-201ENST00000429931 906 ntBASIC18.68■□□□□ 0.58
DUX4Q9UBX2 SRD5A1P1-201ENST00000442297 786 ntBASIC18.68■□□□□ 0.58
DUX4Q9UBX2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.68■□□□□ 0.58
DUX4Q9UBX2 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 AC099791.2-201ENST00000605725 427 ntBASIC18.67■□□□□ 0.58
DUX4Q9UBX2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 AC073130.3-201ENST00000624389 2278 ntBASIC18.67■□□□□ 0.58
DUX4Q9UBX2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DUX4Q9UBX2 AC144652.1-201ENST00000609974 1624 ntBASIC18.67■□□□□ 0.58
DUX4Q9UBX2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 AC092068.2-201ENST00000590491 1708 ntBASIC18.66■□□□□ 0.58
DUX4Q9UBX2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
DUX4Q9UBX2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms