Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KRT18P11-201ENST00000435214 1283 ntBASIC19.7■□□□□ 0.74
LRFN1Q9P244 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.7■□□□□ 0.74
LRFN1Q9P244 AC104187.1-201ENST00000607510 612 ntBASIC19.7■□□□□ 0.74
LRFN1Q9P244 BID-214ENST00000617586 542 ntTSL 5 BASIC19.7■□□□□ 0.74
LRFN1Q9P244 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
LRFN1Q9P244 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 AC087742.1-201ENST00000575880 1738 ntBASIC19.7■□□□□ 0.74
LRFN1Q9P244 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRFN1Q9P244 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRFN1Q9P244 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.69■□□□□ 0.74
LRFN1Q9P244 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
LRFN1Q9P244 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.68■□□□□ 0.74
LRFN1Q9P244 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.68■□□□□ 0.74
LRFN1Q9P244 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.68■□□□□ 0.74
LRFN1Q9P244 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC19.68■□□□□ 0.74
LRFN1Q9P244 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 AC137767.1-201ENST00000602918 1920 ntBASIC19.68■□□□□ 0.74
LRFN1Q9P244 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.68■□□□□ 0.74
LRFN1Q9P244 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
LRFN1Q9P244 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.67■□□□□ 0.74
LRFN1Q9P244 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
LRFN1Q9P244 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.67■□□□□ 0.74
LRFN1Q9P244 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.67■□□□□ 0.74
LRFN1Q9P244 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.67■□□□□ 0.74
LRFN1Q9P244 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LRFN1Q9P244 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
LRFN1Q9P244 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.66■□□□□ 0.74
LRFN1Q9P244 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.66■□□□□ 0.74
LRFN1Q9P244 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.66■□□□□ 0.74
LRFN1Q9P244 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
LRFN1Q9P244 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
LRFN1Q9P244 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LRFN1Q9P244 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN1Q9P244 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LRFN1Q9P244 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN1Q9P244 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN1Q9P244 AC073111.5-205ENST00000641717 521 ntBASIC19.65■□□□□ 0.74
LRFN1Q9P244 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN1Q9P244 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN1Q9P244 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.65■□□□□ 0.74
LRFN1Q9P244 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRFN1Q9P244 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRFN1Q9P244 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRFN1Q9P244 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LRFN1Q9P244 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
LRFN1Q9P244 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.64■□□□□ 0.74
LRFN1Q9P244 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRFN1Q9P244 CDCA4P2-201ENST00000441182 718 ntBASIC19.64■□□□□ 0.73
LRFN1Q9P244 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.64■□□□□ 0.73
LRFN1Q9P244 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.64■□□□□ 0.73
LRFN1Q9P244 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.64■□□□□ 0.73
LRFN1Q9P244 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.64■□□□□ 0.73
LRFN1Q9P244 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms