Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 AC079089.2-201ENST00000531211 1277 ntBASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 AC231657.2-201ENST00000624556 255 ntBASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NLGN3Q9NZ94 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.02■□□□□ 0.96
NLGN3Q9NZ94 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
NLGN3Q9NZ94 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
NLGN3Q9NZ94 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 LINC01960-201ENST00000563759 1884 ntBASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 UBE2DNL-204ENST00000602536 740 ntBASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.01■□□□□ 0.95
NLGN3Q9NZ94 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21■□□□□ 0.95
NLGN3Q9NZ94 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 AC055733.4-201ENST00000638462 1354 ntBASIC21■□□□□ 0.95
NLGN3Q9NZ94 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21■□□□□ 0.95
NLGN3Q9NZ94 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
NLGN3Q9NZ94 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21■□□□□ 0.95
NLGN3Q9NZ94 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 AP001160.3-201ENST00000601484 763 ntBASIC21■□□□□ 0.95
NLGN3Q9NZ94 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21■□□□□ 0.95
NLGN3Q9NZ94 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21■□□□□ 0.95
NLGN3Q9NZ94 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21■□□□□ 0.95
NLGN3Q9NZ94 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 DUX4L16-201ENST00000555130 1264 ntBASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 AL121832.2-201ENST00000610979 668 ntBASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NLGN3Q9NZ94 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 AC007322.1-201ENST00000426983 750 ntBASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 MYCNOS-205ENST00000641950 531 ntBASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
NLGN3Q9NZ94 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
NLGN3Q9NZ94 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NLGN3Q9NZ94 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.97■□□□□ 0.95
NLGN3Q9NZ94 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms