Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 AC024257.2-201ENST00000549699 147 ntBASIC19.92■□□□□ 0.78
POLE3Q9NRF9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 AC233992.3-201ENST00000607491 485 ntBASIC19.92■□□□□ 0.78
POLE3Q9NRF9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
POLE3Q9NRF9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
POLE3Q9NRF9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
POLE3Q9NRF9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
POLE3Q9NRF9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
POLE3Q9NRF9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 AC010542.4-201ENST00000563151 1910 ntBASIC19.88■□□□□ 0.77
POLE3Q9NRF9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 AC133561.4-201ENST00000566112 224 ntBASIC19.88■□□□□ 0.77
POLE3Q9NRF9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.88■□□□□ 0.77
POLE3Q9NRF9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
POLE3Q9NRF9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
POLE3Q9NRF9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 FBXW4P1-201ENST00000426721 2239 ntBASIC19.86■□□□□ 0.77
POLE3Q9NRF9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
POLE3Q9NRF9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms