Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
C12orf4Q9NQ89 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
C12orf4Q9NQ89 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.52■□□□□ 0.55
C12orf4Q9NQ89 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
C12orf4Q9NQ89 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
C12orf4Q9NQ89 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 AC009086.3-201ENST00000623486 1008 ntBASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
C12orf4Q9NQ89 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 LINC01960-201ENST00000563759 1884 ntBASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
C12orf4Q9NQ89 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 AC026471.1-201ENST00000564629 3026 ntBASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 AC021242.3-201ENST00000607598 1377 ntBASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.49■□□□□ 0.55
C12orf4Q9NQ89 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 BX664725.1-201ENST00000438252 379 ntBASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
C12orf4Q9NQ89 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C12orf4Q9NQ89 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms