Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ZNF304Q9HCX3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.33■□□□□ 0.85
ZNF304Q9HCX3 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF304Q9HCX3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZNF304Q9HCX3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.33■□□□□ 0.84
ZNF304Q9HCX3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ZNF304Q9HCX3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.33■□□□□ 0.84
ZNF304Q9HCX3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.33■□□□□ 0.84
ZNF304Q9HCX3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 C1orf229-201ENST00000623686 2258 ntBASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 AC139530.1-201ENST00000575312 1977 ntBASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF304Q9HCX3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 AP004607.4-201ENST00000530158 1459 ntBASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ZNF304Q9HCX3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 AC004854.2-201ENST00000608450 1441 ntBASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF304Q9HCX3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF304Q9HCX3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms