Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL049637.2-201ENST00000641778 930 ntBASIC20.33■□□□□ 0.85
CHD8Q9HCK8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHD8Q9HCK8 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.33■□□□□ 0.84
CHD8Q9HCK8 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD8Q9HCK8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD8Q9HCK8 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHD8Q9HCK8 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.33■□□□□ 0.84
CHD8Q9HCK8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHD8Q9HCK8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD8Q9HCK8 AL049597.2-201ENST00000565575 961 ntBASIC20.32■□□□□ 0.84
CHD8Q9HCK8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD8Q9HCK8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHD8Q9HCK8 PRKY-204ENST00000533551 1019 ntBASIC20.32■□□□□ 0.84
CHD8Q9HCK8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.32■□□□□ 0.84
CHD8Q9HCK8 AC009237.3-201ENST00000393279 1427 ntBASIC20.31■□□□□ 0.84
CHD8Q9HCK8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 AC233702.5-201ENST00000584107 538 ntBASIC20.31■□□□□ 0.84
CHD8Q9HCK8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.31■□□□□ 0.84
CHD8Q9HCK8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 TSPY7P-201ENST00000431358 1114 ntBASIC20.3■□□□□ 0.84
CHD8Q9HCK8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.3■□□□□ 0.84
CHD8Q9HCK8 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CHD8Q9HCK8 TSPY15P-201ENST00000457163 923 ntBASIC20.3■□□□□ 0.84
CHD8Q9HCK8 KRT18P20-201ENST00000548986 1279 ntBASIC20.3■□□□□ 0.84
CHD8Q9HCK8 AC010980.2-201ENST00000587099 1412 ntBASIC20.3■□□□□ 0.84
CHD8Q9HCK8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 KRT17P2-201ENST00000300992 1314 ntBASIC20.29■□□□□ 0.84
CHD8Q9HCK8 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.29■□□□□ 0.84
CHD8Q9HCK8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 AL355075.4-201ENST00000554988 638 ntBASIC20.28■□□□□ 0.84
CHD8Q9HCK8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 AL162412.1-201ENST00000567129 965 ntBASIC20.28■□□□□ 0.84
CHD8Q9HCK8 AL353708.3-201ENST00000610272 989 ntBASIC20.28■□□□□ 0.84
CHD8Q9HCK8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.28■□□□□ 0.84
CHD8Q9HCK8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CHD8Q9HCK8 DUSP8P5-201ENST00000422884 1815 ntBASIC20.27■□□□□ 0.84
CHD8Q9HCK8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CHD8Q9HCK8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CHD8Q9HCK8 HLA-L-211ENST00000482052 1765 ntBASIC20.26■□□□□ 0.83
CHD8Q9HCK8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CHD8Q9HCK8 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD8Q9HCK8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.26■□□□□ 0.83
CHD8Q9HCK8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CHD8Q9HCK8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms