Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 AP004607.7-201ENST00000527152 1677 ntBASIC18.4■□□□□ 0.54
MSL2Q9HCI7 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MSL2Q9HCI7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
MSL2Q9HCI7 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MSL2Q9HCI7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.39■□□□□ 0.54
MSL2Q9HCI7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 AL117328.2-201ENST00000624617 1940 ntBASIC18.39■□□□□ 0.53
MSL2Q9HCI7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MSL2Q9HCI7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 AC027612.3-201ENST00000413684 1047 ntBASIC18.38■□□□□ 0.53
MSL2Q9HCI7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.38■□□□□ 0.53
MSL2Q9HCI7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MSL2Q9HCI7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 YBX1P1-201ENST00000445822 960 ntBASIC18.36■□□□□ 0.53
MSL2Q9HCI7 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.36■□□□□ 0.53
MSL2Q9HCI7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.35■□□□□ 0.53
MSL2Q9HCI7 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms