Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 AC074183.2-201ENST00000623112 922 ntBASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 GOLGA2P6-201ENST00000340929 2049 ntBASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.32□□□□□ -0.12
SND1-IT1Q9HBX3 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SND1-IT1Q9HBX3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 Z98882.1-201ENST00000622160 2253 ntBASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 HSD17B1P1-201ENST00000590052 955 ntBASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 SNX5-217ENST00000606557 1087 ntBASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 PVT1_1.1-201ENST00000615125 194 ntBASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 FP325331.1-202ENST00000623531 1380 ntBASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SND1-IT1Q9HBX3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
SND1-IT1Q9HBX3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 BEX3-202ENST00000372634 753 ntTSL 2 BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SND1-IT1Q9HBX3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms